Evidence map›Paper›PMID 41817395›Full record

ArticleClinical infectious diseases : an official publication of the Infectious Diseases Society of America2026

Diagnostic Accuracy of Molecular Testing on Saliva and Oral Swabs for Pulmonary Tuberculosis.

Deninson Alejandro Vargas, Jose Fernando Fuertes-Bucheli, Andrea Sanchez-Hidalgo, Jairo Palomares Velosa, Alvaro Mauricio Lasso, Amanda J Gupta, Alvaro J Martinez-Valencia, Gustavo Díaz, Lucy Luna, Neal Alexander and 2 more

Abstract read
In one paragraph

Article in Clinical infectious diseases : an official publication of the Infectious Diseases Society of America, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

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0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors.

Deninson Alejandro VargasCentro Internacional de Entrenamiento e Investigaciones Médicas (CIDEIM), Cali, Colombia.ORCID 0000-0002-6575-1919
Jose Fernando Fuertes-BucheliCentro Internacional de Entrenamiento e Investigaciones Médicas (CIDEIM), Cali, Colombia.ORCID 0000-0002-3810-4943
Andrea Sanchez-HidalgoCentro Internacional de Entrenamiento e Investigaciones Médicas (CIDEIM), Cali, Colombia.ORCID 0000-0002-8537-4452
Jairo Palomares VelosaCentro Internacional de Entrenamiento e Investigaciones Médicas (CIDEIM), Cali, Colombia.ORCID 0000-0001-8135-596X
Alvaro Mauricio LassoCentro Internacional de Entrenamiento e Investigaciones Médicas (CIDEIM), Cali, Colombia.ORCID 0000-0002-1230-6707
Amanda J GuptaDepartment of Epidemiology of Microbial Diseases, Yale School of Public Health, New Haven, Connecticut, USA.ORCID 0000-0003-2318-1783
Alvaro J Martinez-ValenciaCentro Internacional de Entrenamiento e Investigaciones Médicas (CIDEIM), Cali, Colombia.ORCID 0000-0002-5641-2392
Gustavo DíazCentro Internacional de Entrenamiento e Investigaciones Médicas (CIDEIM), Cali, Colombia.ORCID 0000-0002-9313-1936
Lucy LunaPrograma de TB y VIH, Secretaría de Salud Distrital, Cali, Colombia.ORCID 0000-0002-2231-4591
Neal AlexanderCentro Internacional de Entrenamiento e Investigaciones Médicas (CIDEIM), Cali, Colombia.ORCID 0000-0002-6707-7876
Beatriz Eugenia FerroDepartamento de Ciencias Básicas Médicas, Facultad de Ciencias de la Salud, Universidad Icesi, Cali, Colombia.ORCID 0000-0001-6045-1610
J Lucian DavisDepartment of Epidemiology of Microbial Diseases, Yale School of Public Health, New Haven, Connecticut, USA.ORCID 0000-0002-8629-9992

Funding

Fogarty International Center of the National Institutes of Health D43TW006589National Institute of Allergy and Infectious Diseases at the US National Institutes of Health R21AI174129
6 · The paper itself

Abstract

backgroundRapid, accurate, nonsputum tests are needed to close gaps in tuberculosis (TB) detection. We evaluated the diagnostic performance of molecular testing on saliva and oral swabs.

methodsWe conducted a nested case-control study with 1:1 incidence-density sampling within a prospective cohort of adults and children undergoing evaluation for pulmonary TB at primary care centers in Colombia (July 2023-August 2024). Participants provided a sputum sample for liquid mycobacterial culture and paired saliva and nylon-flocked oral swabs for storage at -80°C. A microbiologist blinded to clinical and culture data performed Xpert MTB/RIF Ultra on thawed saliva and on swab eluate, each mixed 1:1 with sample reagent. We calculated the sensitivity and specificity of saliva and swab against sputum culture and compared them using McNemar's test.

resultsAmong 648 enrolled participants, we tested saliva and swabs from all 95 individuals with culture-confirmed TB and 95 matched culture-negative controls (n = 190). Saliva sensitivity was 90.5% (95% confidence interval [CI], 82.8-95.6), and specificity was 95.8% (95% CI, 89.6-98.8). Swab sensitivity was 71.6% (95% CI, 61.4-80.4), and specificity was 99% (95% CI, 94.3-100). Saliva sensitivity exceeded that of swab by an absolute difference of 18.9% (95% CI, +10.0 to +27.9, P < .001), but there was no significant difference in specificity (-3.2%, 95% CI, -7.7 to +1.4, P = .25). Over 95% of participants found saliva and swab collection procedures acceptable.

conclusionsBoth saliva and swabs were highly sensitive and specific for culture-confirmed pulmonary TB. Saliva sensitivity exceeded the World Health Organization's ≥80% target for a low-complexity, nonsputum TB diagnostic test.

Indexed as

Molecular Diagnostic TechniquesMycobacterium tuberculosisSalivaTuberculosis, PulmonaryAdolescentAdultAgedCase-Control StudiesChildColombiaFemaleHumansMaleMiddle AgedProspective StudiesRapid Diagnostic TestsColombiamolecular diagnostic techniquesMycobacterium tuberculosissensitivity and specificitytuberculosis

Identifiers

PMID41817395
PMCPMC13341261

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.