Evidence map›Paper›PMID 41815156›Full record

ArticleTranslational cancer research2026

Development and validation of an 11-CpG methylation signature-based nomogram for predicting prognosis in early-onset breast cancer.

Jingyi Tang, Yan Li, Xiaofan Han

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Article in Translational cancer research, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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4 · The record

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5 · Who and what money

Authors and funding

3 authors.

Jingyi TangSchool of Pharmacy and Bioengineering, Chongqing University of Technology, Chongqing, China.ORCID https://orcid.org/0009-0002-0841-0795
Yan LiMolecular Biology Laboratory, Chongqing Medical and Pharmaceutical College, Chongqing, China.ORCID https://orcid.org/0000-0001-5151-8318
Xiaofan HanMolecular Biology Laboratory, Chongqing Medical and Pharmaceutical College, Chongqing, China.ORCID https://orcid.org/0000-0001-8284-0713

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Background: Early-onset breast cancer (EOBC) is rising in incidence and poses unique clinical and biological challenges, necessitating reliable prognostic tools. Given that aberrant DNA methylation is an early and stable epigenetic alteration with prognostic relevance in tumorigenesis, this study aimed to construct a methylation-based prognostic model to improve risk stratification and personalized management strategies for EOBC patients. Methods: We conducted an integrative bioinformatics analysis of multiple datasets to identify EOBC-specific methylation markers. Differentially methylated probes (DMPs) were screened, and survival-associated CpG sites (CpGs) were refined using Cox and least absolute shrinkage and selection operator (LASSO) regression analyses. A methylation signature for EOBC (MSEO) was developed and combined with clinicopathological factors to construct a prognostic nomogram. Predictive performance was evaluated by the area under the curve (AUC) and calibration in internal and independent external cohorts. Results: A total of 19,343 DMPs were identified, of which 127 significantly associated with overall survival (OS). An 11-CpG-based methylation signature was developed and validated as an independent prognostic factor. Combining MSEO with clinicopathological variables yielded a nomogram with superior predictive accuracy, achieving AUC values of 0.873-0.912 in the training cohort, 0.835-0.971 in the test cohort, and 0.756-0.868 in the external validation cohort. Calibration analyses confirmed strong agreement between predicted and observed survival. Conclusions: These findings introduce a robust methylation-based prognostic model for EOBC, providing a clinically relevant tool for individualized survival prediction and patient management.

Indexed as

CpG sites (CpGs)early-onset breast cancer (EOBC)methylationnomogramprognosis

Identifiers

PMID41815156
PMCPMC12971583

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