Evidence map›Paper›PMID 41814490›Full record

ArticleJournal of computational chemistry2026

DFTB Parametrization at the Example of Platinum-Implementation, Validation and Practical Considerations.

Felix R S Purtscher, Armin Penz, Josef M Gallmetzer, Jakob Gamper, Thomas S Hofer

Abstract read
In one paragraph

Article in Journal of computational chemistry, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
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1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Felix R S PurtscherInstitute of General, Inorganic and Theoretical Chemistry, Center for Chemistry and Biomedicine, University of Innsbruck, Innsbruck, Austria.ORCID https://orcid.org/0000-0002-3099-5964
Armin PenzInstitute of General, Inorganic and Theoretical Chemistry, Center for Chemistry and Biomedicine, University of Innsbruck, Innsbruck, Austria.ORCID https://orcid.org/0009-0003-9702-1907
Josef M GallmetzerInstitute of General, Inorganic and Theoretical Chemistry, Center for Chemistry and Biomedicine, University of Innsbruck, Innsbruck, Austria.
Jakob GamperInstitute of General, Inorganic and Theoretical Chemistry, Center for Chemistry and Biomedicine, University of Innsbruck, Innsbruck, Austria.
Thomas S HoferInstitute of General, Inorganic and Theoretical Chemistry, Center for Chemistry and Biomedicine, University of Innsbruck, Innsbruck, Austria.ORCID https://orcid.org/0000-0002-6559-1513

Funding

Austrian Science Fund P 35427-NBL
6 · The paper itself

Abstract

Practical considerations for the parametrization of the transition metal platinum within the third-order density-functional tight-binding (DFTB3) method are presented, enabling straightforward parametrizations of interactions between Pt and elements from the s-, p-, and d-blocks of the periodic table. The newly developed parameter set is fully compatible with the 3ob DFTB3 framework, thereby extending the chemical space accessible to DFTB and enabling rapid and reliable simulations of platinum-containing systems. The parameters were initially benchmarked against more than 1300 Pt-containing structures extracted from the Cambridge Crystallographic Data Centre, as well as over 50 reference systems optimized at the MP2/cc-pVTZ level of theory. Further validation included a challenging binuclear platinum(II) complex, QM/MM molecular dynamics (MD) simulations of Pt(II) complexes in aqueous solution, and 3d-periodic DFTB-based molecular dynamics simulations of cisplatin embedded in metal-organic framework (MOF) hosts. Analysis of the resulting trajectories demonstrates a robust and consistent description of platinum coordination environments. To facilitate reproducibility and adoption, example Python scripts covering each step of the parametrization workflow are provided as part of the Supporting Information.

Identifiers

PMID41814490
PMCPMC12979722

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.