Evidence map›Paper›PMID 41810912›Full record

ArticleBehavioural neurology2026

Identification and Verification of Mitochondria-Related Diagnostic Markers of Spinal Cord Injury by WGCNA and Machine Learning.

Haifeng Chen, Wei Cai, Yunpeng Zhang, Xiaoming Tang, Jian Dai, Yao Li, Jian Ma

Abstract read
In one paragraph

Article in Behavioural neurology, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Haifeng ChenDepartment of Orthopedic, The Affiliated Huaian No. 1 People's Hospital of Nanjing Medical University, Huaian, Jiangsu, China, njmu.edu.cn.
Wei CaiDepartment of Orthopedic, The Affiliated Huaian No. 1 People's Hospital of Nanjing Medical University, Huaian, Jiangsu, China, njmu.edu.cn.
Yunpeng ZhangDepartment of Orthopedic, The Affiliated Huaian No. 1 People's Hospital of Nanjing Medical University, Huaian, Jiangsu, China, njmu.edu.cn.
Xiaoming TangDepartment of Orthopedic, The Affiliated Huaian No. 1 People's Hospital of Nanjing Medical University, Huaian, Jiangsu, China, njmu.edu.cn.
Jian DaiDepartment of Orthopedic, The Affiliated Huaian No. 1 People's Hospital of Nanjing Medical University, Huaian, Jiangsu, China, njmu.edu.cn.
Yao LiDepartment of Orthopedic, The Affiliated Huaian No. 1 People's Hospital of Nanjing Medical University, Huaian, Jiangsu, China, njmu.edu.cn.
Jian MaDepartment of Orthopedic, The Affiliated Huaian No. 1 People's Hospital of Nanjing Medical University, Huaian, Jiangsu, China, njmu.edu.cn.ORCID https://orcid.org/0009-0009-3966-9135

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundSpinal cord injury (SCI) significantly impacts patients, with mitochondrial dysfunction playing a critical role in its pathology. Identifying mitochondria-related genes may offer new therapeutic and prognostic insights.

methodsRNA sequencing data from the GEO database were analyzed to identify differentially expressed genes (DEGs). Functional enrichment analyses were conducted, and weighted gene coexpression network analysis (WGCNA) alongside machine learning algorithms was used to identify key mitochondria-related genes. Immune infiltration was assessed using the EPIC algorithm, and single-cell RNA sequencing (scRNA-seq) data were analyzed for cellular diversity.

resultsA total of 2566 upregulated and 2634 downregulated genes were identified in SCI versus control samples. GO and KEGG enrichment analyses revealed these DEGs were primarily involved in oxidative stress, mitochondrial function, and immune pathways, including necroptosis and T cell receptor signaling. Then, 1578 genes with the strongest correlation to SCI were selected by WGCNA. By integrating DEGs, WGCNA module genes, and mitochondria-related genes, 76 candidate genes were obtained and used to construct a PPI network. Six hub genes (NDUFB3, SLC25A24, SLC25A40, GSTZ1, MAOA, and MRPL12) were identified by machine learning, all showing strong diagnostic potential (AUC > 0.77). Immune infiltration analysis indicated reduced B and T cell infiltration and increased macrophage activity in SCI samples. scRNA-seq analysis further revealed higher expression of NDUFB3 in dendritic cells and MAOA in pro-B cells, suggesting their involvement in immune regulation and mitochondrial dysfunction.

conclusionThese six genes represent potential biomarkers and therapeutic targets for SCI, providing insights into its molecular mechanisms and immune response.

Indexed as

MitochondriaSpinal Cord InjuriesBiomarkersGene Expression ProfilingGene Regulatory NetworksHumansMachine LearningBiomarkersbioinformaticsimmune responsemachine learningmitochondriaspinal cord injury

Identifiers

PMID41810912
PMCPMC13580798

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.