Evidence map›Paper›PMID 41810006›Full record

ArticleJournal of public health in Africa2026

Evaluation of the concordance between nasopharyngeal and oropharyngeal swabs in the detection of COVID-19.

Michel C Tommo Tchouaket, Joseph Fokam, Ezéchiel N Semengue, Yagai Bouba, Collins A Chenwi, Alex D Nka, Mirice Mbazo'o, Désiré Takou, Samuel M Sosso, Grâce A Beloumou and 16 more

Abstract read
In one paragraph

Article in Journal of public health in Africa, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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0citing papers in PubMed
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1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

26 authors.

Michel C Tommo TchouaketChantal Biya International Reference Centre for Research on HIV/AIDS Prevention and Management (CIRCB), Yaoundé, Cameroon.ORCID https://orcid.org/0000-0002-7186-8515
Joseph FokamChantal Biya International Reference Centre for Research on HIV/AIDS Prevention and Management (CIRCB), Yaoundé, Cameroon.ORCID https://orcid.org/0000-0002-1501-2763
Ezéchiel N SemengueChantal Biya International Reference Centre for Research on HIV/AIDS Prevention and Management (CIRCB), Yaoundé, Cameroon.ORCID https://orcid.org/0000-0001-8768-2371
Yagai BoubaChantal Biya International Reference Centre for Research on HIV/AIDS Prevention and Management (CIRCB), Yaoundé, Cameroon.ORCID https://orcid.org/0000-0002-4187-683X
Collins A ChenwiChantal Biya International Reference Centre for Research on HIV/AIDS Prevention and Management (CIRCB), Yaoundé, Cameroon.ORCID https://orcid.org/0000-0002-6749-1436
Alex D NkaChantal Biya International Reference Centre for Research on HIV/AIDS Prevention and Management (CIRCB), Yaoundé, Cameroon.ORCID https://orcid.org/0000-0002-9358-8661
Mirice Mbazo'oFaculty of Medicine and Biomedical Sciences, University of Yaoundé I, Yaoundé, Cameroon.ORCID https://orcid.org/0009-0008-6687-775X
Désiré TakouChantal Biya International Reference Centre for Research on HIV/AIDS Prevention and Management (CIRCB), Yaoundé, Cameroon.ORCID https://orcid.org/0000-0003-2601-7508
Samuel M SossoChantal Biya International Reference Centre for Research on HIV/AIDS Prevention and Management (CIRCB), Yaoundé, Cameroon.ORCID https://orcid.org/0000-0002-2589-7075
Grâce A BeloumouChantal Biya International Reference Centre for Research on HIV/AIDS Prevention and Management (CIRCB), Yaoundé, Cameroon.ORCID https://orcid.org/0000-0002-6870-7366
Aude C Ka'eChantal Biya International Reference Centre for Research on HIV/AIDS Prevention and Management (CIRCB), Yaoundé, Cameroon.ORCID https://orcid.org/0000-0002-2381-4299
Aurelie M NguekoChantal Biya International Reference Centre for Research on HIV/AIDS Prevention and Management (CIRCB), Yaoundé, Cameroon.ORCID https://orcid.org/0000-0002-0733-5730
Nadine FainguemChantal Biya International Reference Centre for Research on HIV/AIDS Prevention and Management (CIRCB), Yaoundé, Cameroon.ORCID https://orcid.org/0000-0002-8497-7948
Laeticia Y HeunkoChantal Biya International Reference Centre for Research on HIV/AIDS Prevention and Management (CIRCB), Yaoundé, Cameroon.ORCID https://orcid.org/0000-0002-0286-6030
Sandrine C NdjeyepChantal Biya International Reference Centre for Research on HIV/AIDS Prevention and Management (CIRCB), Yaoundé, Cameroon.ORCID https://orcid.org/0009-0001-7903-6182
Willy L PaboChantal Biya International Reference Centre for Research on HIV/AIDS Prevention and Management (CIRCB), Yaoundé, Cameroon.ORCID https://orcid.org/0000-0002-5194-6715
Davy-Hyacinthe G AnguechiaChantal Biya International Reference Centre for Research on HIV/AIDS Prevention and Management (CIRCB), Yaoundé, Cameroon.ORCID https://orcid.org/0009-0005-7377-1652
Naomi-Karell EtameChantal Biya International Reference Centre for Research on HIV/AIDS Prevention and Management (CIRCB), Yaoundé, Cameroon.ORCID https://orcid.org/0009-0004-4320-0982
Evariste MolimbouChantal Biya International Reference Centre for Research on HIV/AIDS Prevention and Management (CIRCB), Yaoundé, Cameroon.ORCID https://orcid.org/0009-0004-8359-3178
Rachel A MundoChantal Biya International Reference Centre for Research on HIV/AIDS Prevention and Management (CIRCB), Yaoundé, Cameroon.ORCID https://orcid.org/0000-0002-0479-3840
Aissatou AbbaChantal Biya International Reference Centre for Research on HIV/AIDS Prevention and Management (CIRCB), Yaoundé, Cameroon.ORCID https://orcid.org/0000-0002-1625-2152
Gregory-Edie Halle-EkaneSchool of Health Sciences, Catholic University of Central Africa, Yaoundé, Cameroon.ORCID https://orcid.org/0000-0003-4304-9210
Anne-Cecile Z-K BissekFaculty of Medicine and Biomedical Sciences, University of Yaoundé I, Yaoundé, Cameroon.ORCID https://orcid.org/0009-0004-2300-0748
Vittorio ColizziChantal Biya International Reference Centre for Research on HIV/AIDS Prevention and Management (CIRCB), Yaoundé, Cameroon.ORCID https://orcid.org/0000-0003-0007-8580
Carlo-Federico PernoChantal Biya International Reference Centre for Research on HIV/AIDS Prevention and Management (CIRCB), Yaoundé, Cameroon.ORCID https://orcid.org/0000-0002-0825-5388
Alexis NdjoloChantal Biya International Reference Centre for Research on HIV/AIDS Prevention and Management (CIRCB), Yaoundé, Cameroon.ORCID https://orcid.org/0000-0002-4951-9271

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Background: Nasopharyngeal swabs (NASO) cause discomfort for patients, which can discourage them from getting tested for COVID-19 and limit case detection. It is therefore necessary to consider an alternative, more comfortable swab. Aim: Evaluated the concordance between nasopharyngeal and oropharyngeal sampling for COVID-19 diagnosis in the Cameroonian context. Setting: This study was carried out at "Chantal Biya" International Reference Centre for Research on HIV/AIDS Prevention and Management (CIRCB) in Yaoundé, Cameroon. Methods: A comparative study was conducted in April 2021 among consenting participants tested for COVID-19 at "Chantal Biya" International Reference Centre for Research on HIV/AIDS Prevention and Management (CIRCB) in Yaoundé, Cameroon. Sampling began with nasopharyngeal swabs, followed by oropharyngeal swabs, all taken by the same technician, and analysis was carried out using polymerase chain reaction (PCR) tests on the Abbott platform. Statistical analyses were performed using GraphPad version 6.0; Results: A total of 154 participants were enrolled (59.7% male, median age 38 years, interquartile range [IQR]: 30-49). Following PCR testing, the overall COVID-19 positivity rate was 36.36% (56/154), with 34.41% ( Conclusion: Our evidence suggests a superiority effect of nasopharyngeal in detecting cases of COVID-19. However, the overall high PPV of oropharyngeal swab, and its improved performance with high viral load. Contribution: Therefore, in case of counter-indication to nasopharyngeal swabbing, oropharyngeal can be an acceptable alternative.

Indexed as

concordanceCOVID-19detectionnasopharyngeal swabsoropharyngeal swabs

Identifiers

PMID41810006
PMCPMC12969506

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.