Evidence map›Paper›PMID 41808151›Full record

ReviewEpigenetics & chromatin2026

All hands on DEK: structural insights into a unique histone modifier and chromatin remodeler.

E J Peters, K L Gardner, L M Privette Vinnedge

Abstract readReview
In one paragraph

Review in Epigenetics & chromatin, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. microPublication biology · 2026
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

E J PetersDepartment of Cancer Biology, University of Cincinnati College of Medicine, Cincinnati, OH, USA.ORCID http://orcid.org/0009-0005-1844-2581
K L GardnerDivision of Oncology, Cancer and Blood Diseases Institute, Cincinnati Children's Hospital Medical Center, Cincinnati, OH, USA.ORCID http://orcid.org/0009-0006-4194-9441
L M Privette VinnedgeDepartment of Cancer Biology, University of Cincinnati College of Medicine, Cincinnati, OH, USA. Lisa.Privette@cchmc.org.ORCID http://orcid.org/0000-0003-2087-4920

Funding

Mechanisms coupling DEK to oncogenesisR37CA218072 · NCI · CINCINNATI CHILDRENS HOSP MED CTR · PI PRIVETTE VINNEDGE, LISA M. · 2018 to 2024
$2.5M
NIH HHS R37CA218072
6 · The paper itself

Abstract

DEK is a chromatin-associated, DNA-binding protein with unique properties that place it in its own protein class. First discovered in 1992 as a fusion protein in acute myeloid leukemia, DEK gained further attention in the mid-2000s as a growing number of studies identified its connections to chromatin architecture and subsequent impact on pathologies such as cancer and autoimmune diseases. Current evidence indicates that DEK can alter the topology of nucleic acids in a variety of biological processes, including DNA replication, DNA repair, chromatin organization, epigenetic modification, transcription, and mRNA splicing. Interestingly, DEK is highly evolutionarily conserved among higher eukaryotes, and this, combined with its involvement in such a diverse array of processes, highlights its biological significance. Interest in DEK is further driven by its status as a potent oncogene, as it is transcriptionally upregulated in most solid tumors tested to date, with high DEK expression correlating with poor survival and more aggressive tumors. Recently, advances in cryogenic electron microscopy have made it possible to visualize the structural basis of DEK-nucleosome interactions, providing concrete mechanistic insights into how DEK influences gene regulation and transcription. These findings clarify prior observations and open new avenues for exploring the biological and clinical relevance of DEK.

Indexed as

Chromatin Assembly and DisassemblyChromosomal Proteins, Non-HistoneHistonesOncogene ProteinsPoly-ADP-Ribose Binding ProteinsAnimalsChromatinHumansNucleosomesChromatinChromosomal Proteins, Non-HistoneDEK protein, humanHistonesNucleosomesOncogene ProteinsPoly-ADP-Ribose Binding ProteinsChromatin remodelingDEKHeterochromatinHistone H3

Identifiers

PMID41808151
PMCPMC13088671

What OpenQuestion holds

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LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.