Evidence map›Paper›PMID 41807376›Full record

ArticleNature communications2026

Acinetobacter baumannii's lifestyle includes soil-dwelling colonization of decaying plant material and airborne spread.

Gottfried Wilharm, Evelyn Skiebe, Andżelina Michalska, Paul G Higgins, Kristin Weber, Christoph Schaudinn, Christof Neugebauer, Katharina Görlitz, Gideon Meimers, Yana Rizova and 38 more

Abstract read
In one paragraph

Article in Nature communications, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Review
  2. Review
  3. Article
  4. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

48 authors.

Gottfried WilharmRobert Koch Institute, Wernigerode Branch, Burgstr. 37, Wernigerode, Germany. wilharmg@gmail.com.ORCID http://orcid.org/0000-0002-1771-6799
Evelyn SkiebeRobert Koch Institute, Wernigerode Branch, Burgstr. 37, Wernigerode, Germany.
Andżelina MichalskaInstitute of Biological Sciences, University of Zielona Góra, Prof. Z. Szafrana Street 1, Zielona Góra, Poland.
Paul G HigginsInstitute for Medical Microbiology, Immunology and Hygiene, Faculty of Medicine and University Hospital Cologne, University of Cologne, Cologne, Germany.ORCID http://orcid.org/0000-0001-8677-9454
Kristin WeberRobert Koch Institute, Wernigerode Branch, Burgstr. 37, Wernigerode, Germany.
Christoph SchaudinnRobert Koch Institute, Seestr. 10, Berlin, Germany.
Christof NeugebauerRobert Koch Institute, Wernigerode Branch, Burgstr. 37, Wernigerode, Germany.
Katharina GörlitzRobert Koch Institute, Wernigerode Branch, Burgstr. 37, Wernigerode, Germany.
Gideon MeimersRobert Koch Institute, Wernigerode Branch, Burgstr. 37, Wernigerode, Germany.
Yana RizovaTrepetlika 7, Lozenets, Sofia, Bulgaria.
Ulrike BlaschkeRobert Koch Institute, Wernigerode Branch, Burgstr. 37, Wernigerode, Germany.
Christine HeiderRobert Koch Institute, Wernigerode Branch, Burgstr. 37, Wernigerode, Germany.
Christiane CunyRobert Koch Institute, Wernigerode Branch, Burgstr. 37, Wernigerode, Germany.
Stephan DrewesInstitute of Novel and Emerging Infectious Diseases, Friedrich-Loeffler-Institut, Federal Research Institute for Animal Health, Südufer 10, Greifswald-Insel Riems, Germany.
Elisa HeuserInstitute of Novel and Emerging Infectious Diseases, Friedrich-Loeffler-Institut, Federal Research Institute for Animal Health, Südufer 10, Greifswald-Insel Riems, Germany.
Kathrin JeskeInstitute of Novel and Emerging Infectious Diseases, Friedrich-Loeffler-Institut, Federal Research Institute for Animal Health, Südufer 10, Greifswald-Insel Riems, Germany.
Jens JacobJulius Kühn-Institute, Federal Research Centre for Cultivated Plants, Institute for Epidemiology and Pathogen Diagnostics, Rodent Research, Toppheideweg 88, Münster, Germany.ORCID http://orcid.org/0000-0002-5136-6606
Rainer G UlrichInstitute of Novel and Emerging Infectious Diseases, Friedrich-Loeffler-Institut, Federal Research Institute for Animal Health, Südufer 10, Greifswald-Insel Riems, Germany.ORCID http://orcid.org/0000-0002-5620-1528
Marcin BocheńskiInstitute of Biological Sciences, University of Zielona Góra, Prof. Z. Szafrana Street 1, Zielona Góra, Poland.ORCID http://orcid.org/0000-0002-7081-809X
Mariusz KasprzakInstitute of Biological Sciences, University of Zielona Góra, Prof. Z. Szafrana Street 1, Zielona Góra, Poland.
Ewa BurdaInstitute of Biological Sciences, University of Zielona Góra, Prof. Z. Szafrana Street 1, Zielona Góra, Poland.
Mateusz CieplińskiInstitute of Biological Sciences, University of Zielona Góra, Prof. Z. Szafrana Street 1, Zielona Góra, Poland.
Ireneusz KaługaEcoLogical Group, Brzozów 19, Suchożebry, Poland.
Łukasz JankowiakInstitute of Biology, University of Szczecin, Wąska 13, Szczecin, Poland.ORCID http://orcid.org/0000-0002-3843-9778
José I AguirreDepartment of Biodiversity, Ecology and Evolution Universidad Complutense de Madrid, Madrid, Spain.
Alejandro López-GarcíaDepartment of Biodiversity, Ecology and Evolution Universidad Complutense de Madrid, Madrid, Spain.
Ursula HöfleHealth and Biotechnology (SaBio) Research Group, National Wildlife Research Institute, IREC (CSIC-UCLM), Ciudad Real, Spain.ORCID http://orcid.org/0000-0002-6868-079X
Zuzanna JagielloDepartment of Zoology, Poznań University of Life Sciences, ul. Wojska Polskiego 71C, Poznań, Poland.
Marcin TobółkaDepartment of Zoology, Poznań University of Life Sciences, ul. Wojska Polskiego 71C, Poznań, Poland.
Bartosz JanicDepartment of Ecology and Vertebrate Zoology, Faculty of Biology and Environmental Protection, University of Lodz, Banacha 12/16, Lodz, Poland.ORCID http://orcid.org/0000-0002-2134-1555
Piotr ZielińskiDepartment of Ecology and Vertebrate Zoology, Faculty of Biology and Environmental Protection, University of Lodz, Banacha 12/16, Lodz, Poland.ORCID http://orcid.org/0000-0002-9233-6235
Maciej KamińskiDepartment of Biodiversity Studies and Bioeducation, Faculty of Biology and Environmental Protection, University of Lodz, Banacha 1/3, Lodz, Poland.ORCID http://orcid.org/0000-0002-4290-6308
Johannes FrischMuseum für Naturkunde, Invalidenstraße 43, Berlin, Germany.
Joachim Siekiera, Ul. Rzeczna 17, Żywocice, Poland.
Andreas F WendelInstitute of Hygiene, Cologne Merheim Medical Center, University Hospital of Witten/Herdecke, Cologne, Germany.
Paul BraunerUnit for Biological Agents, Federal Institute for Occupational Safety and Health, Nöldnerstr. 40-42, Berlin, Germany.
Udo JäckelUnit for Biological Agents, Federal Institute for Occupational Safety and Health, Nöldnerstr. 40-42, Berlin, Germany.
Michael KaatzVogelschutzwarte Storchenhof Loburg e.V, Chausseestr. 18, Loburg, Germany.
Stefanie MüllerInstitute of Microbiology and Epizootics, Veterinary Faculty, Freie Universität Berlin, Robert-von-Ostertag Str. 7-13, Berlin, Germany.
Antina Lübke-BeckerInstitute of Microbiology and Epizootics, Veterinary Faculty, Freie Universität Berlin, Robert-von-Ostertag Str. 7-13, Berlin, Germany.
Lothar H WielerRobert Koch Institute, Nordufer 20, Berlin, Germany.
Johanna von WachsmannRobert Koch Institute, Nordufer 20, Berlin, Germany.
Lakshmipriya ThrukondaRobert Koch Institute, Nordufer 20, Berlin, Germany.
Mustafa HelalRobert Koch Institute, Nordufer 20, Berlin, Germany.
Lennard EppingRobert Koch Institute, Nordufer 20, Berlin, Germany.
Silver A WolfRobert Koch Institute, Nordufer 20, Berlin, Germany.ORCID http://orcid.org/0009-0004-8164-7216
Torsten SemmlerRobert Koch Institute, Nordufer 20, Berlin, Germany.ORCID http://orcid.org/0000-0002-2225-7267
Leszek JerzakInstitute of Biological Sciences, University of Zielona Góra, Prof. Z. Szafrana Street 1, Zielona Góra, Poland.

Funding

Deutsche Forschungsgemeinschaft (German Research Foundation) DFG-FOR 2251EC | Erasmus+ 20/SMP/2015/16Wellcome Trust
6 · The paper itself

Abstract

Acinetobacter baumannii is a Gram-negative nosocomial pathogen that is notorious for its rapid development of antibiotic resistance. However, its ecology and evolution outside hospital settings remain poorly defined. Here, we demonstrate that the natural lifestyle of A. baumannii includes soil-dwelling and airborne dissemination, which helps explaining its adaptability and tolerance to desiccation, radiation and antibiotics, and thus its predisposition to establish within hospitals. Starting from white stork nestlings previously discovered as a reservoir, we studied food chains and associated environments and identified soil and decaying plants as habitats. We demonstrate that sterilized plant material is rapidly colonized by airborne A. baumannii. A set of 401 genomes were sequenced and compared to publicly available genomes, revealing numerous links between wildlife isolates and hospital strains, and disclosing intercontinental dispersal. Our pan-genome estimate of the species (~51,000 gene families) more than doubles that of previous studies. Our data further suggest massive radiation of the species early after its emergence, possibly fostered by human activity since the Neolithic. Now, it is possible to study the ecology and evolution of A. baumannii in nature at an unprecedented temporal and spatial resolution and to elucidate the adaptive evolution of environmental bacteria towards multidrug-resistant opportunistic pathogens.

Indexed as

Acinetobacter baumanniiAcinetobacter InfectionsAir MicrobiologyPlantsSoil MicrobiologyAnimalsGenome, BacterialHumansPhylogeny

Identifiers

PMID41807376
PMCPMC12976118

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