Evidence map›Paper›PMID 41806154›Full record

ArticleJournal of cardiovascular translational research2026

Comprehensive Analysis of Bulk RNA-seq, Machine Learning, Mendelian Randomization, and Single-Cell Sequencing Unravels SLC22A3 as a Solute Carrier Superfamily-Associated Biomarker in Atherosclerosis.

Yongchao Yu, Lan Wang, Tianhui Wang, Ya Zhang, Xiaomeng Su, Xingyang Dai, Xiangang Mo

Abstract read
PubMed Publisher
In one paragraph

Article in Journal of cardiovascular translational research, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Yongchao YuComprehensive Ward, The Affiliated Hospital of Guizhou Medical University, Guiyang, 550004, China.
Lan WangComprehensive Ward, The Affiliated Hospital of Guizhou Medical University, Guiyang, 550004, China.
Tianhui WangComprehensive Ward, The Affiliated Hospital of Guizhou Medical University, Guiyang, 550004, China.
Ya ZhangGuiyang Healthcare Vocational University, Guiyang, 550081, Guizhou, China.
Xiaomeng SuComprehensive Ward, The Affiliated Hospital of Guizhou Medical University, Guiyang, 550004, China.
Xingyang DaiComprehensive Ward, The Affiliated Hospital of Guizhou Medical University, Guiyang, 550004, China.
Xiangang MoComprehensive Ward, The Affiliated Hospital of Guizhou Medical University, Guiyang, 550004, China. moxiangang123@126.com.ORCID 0000-0001-6354-7669

Funding

National Natural Science Foundation of China 31660288National Natural Science Foundation of China 82160097
6 · The paper itself

Abstract

Growing evidence implicates solute carrier (SLC) superfamily in atherosclerosis (AS) pathogenesis. This study identified SLC22A3 as a novel AS biomarker and therapeutic target using multi-omics analysis. Integrating WGCNA and machine learning (LASSO, SVM-RFE, XGBoost, Random Forest) on bulk RNA-seq (GSE43292) pinpointed SLC22A3. External datasets (GSE28829, GSE163154) confirmed significant SLC22A3 downregulation in AS (P < 0.001) and high diagnostic accuracy (AUC > 0.9). SMR analysis revealed a causal genetic link between SLC22A3 expression and reduced AS risk (P < 0.05, OR = 0.512 (95% CI: 0.280-0.939))). scRNA-seq showed SLC22A3 specifically expressed in smooth muscle cells (SMCs), significantly reduced in symptomatic patients. Molecular docking and molecular dynamics simulation nominated six FDA-approved drugs as potential SLC22A3-targeting therapeutics. Experimental validation further confirmed the significant downregulation of SLC22A3 at both mRNA and protein levels. SLC22A3 is a promising diagnostic biomarker and therapeutic target for AS, functionally linked to SMCs.

Indexed as

AtherosclerosisMachine LearningMyocytes, Smooth MuscleOrganic Cation Transport ProteinsRNA-SeqGene Expression ProfilingGenetic MarkersGenetic Predisposition to DiseaseHumansMolecular Docking SimulationOrganic Cation Transporter 3Predictive Value of TestsGenetic MarkersOrganic Cation Transporter 3Organic Cation Transport ProteinsAtherosclerosisDrug repositioningMachine learningSLC22A3Solute carrier superfamily

Identifiers

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.