ArticleScientific data2026
Chromosome-scale reference genome assembly and annotation of Prunus scopulorum.
Article in Scientific data, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.
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Abstract
Prunus scopulorum is a valuable Chinese wild cherry germplasm resource. It can survive under relatively cold climate conditions and is highly adaptable to the environment. Here, we successfully constructed a high-quality whole-genome map of P. scopulorum at the chromosome level. The genome size is 248.6 Mb, with a scaffold N50 of 27.83 Mb. A total of ~111.76 Mb of repetitive sequences were identified, accounting for 44.96% of the total genome, of which 1.34% were long interspersed nuclear elements (LINEs), 18.29% were long terminal repeats (LTRs), and 0.22% were short interspersed nuclear elements (SINEs). The benchmarking universal single-copy orthologues (BUSCOs) value reached 97.0%, and the LTR assembly index (LAI) reached the reference genome level (17.04). Further analysis led us to predict the presence of 32,542 protein-coding genes, 99.41% of which are functionally annotated. This high-quality genome assembly provides valuable resources for understanding species evolution in the genus Prunus and promoting the study of important traits in P. scopulorum.
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