Evidence map›Paper›PMID 41803147›Full record

ArticleNature communications2026

CAMPER: mechanistic artificial intelligence for designing peptides that target MRSA persisters.

Fadi Shehadeh, Biswajit Mishra, Raquel Ferrer-Espada, Anindya Basu, LewisOscar Felix, Charilaos Dellis, Narchonai Ganesan, Liyang Zhang, Andrew T Martens, Youlian Goulev and 5 more

Abstract read
In one paragraph

Article in Nature communications, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors.

Fadi Shehadeh *Department of Medicine, Houston Methodist Hospital, Houston, TX, USA.ORCID http://orcid.org/0000-0002-9552-4004
Biswajit Mishra *Department of Medicine, Houston Methodist Hospital, Houston, TX, USA.
Raquel Ferrer-EspadaDepartment of Systems Biology, Blavatnik Institute, Harvard Medical School, Boston, MA, USA.ORCID http://orcid.org/0000-0002-5711-5349
Anindya BasuSchool of Pharmaceutical Sciences, Rajiv Gandhi Technological University, Bhopal, India.
LewisOscar FelixDepartment of Medicine, Houston Methodist Hospital, Houston, TX, USA.
Charilaos DellisDepartment of Medicine, Houston Methodist Hospital, Houston, TX, USA.ORCID http://orcid.org/0000-0001-6195-0999
Narchonai GanesanDepartment of Medicine, Houston Methodist Hospital, Houston, TX, USA.
Liyang ZhangDepartment of Medicine, Houston Methodist Hospital, Houston, TX, USA.
Andrew T MartensDepartment of Systems Biology, Blavatnik Institute, Harvard Medical School, Boston, MA, USA.ORCID http://orcid.org/0000-0002-9888-9076
Youlian GoulevDepartment of Systems Biology, Blavatnik Institute, Harvard Medical School, Boston, MA, USA.ORCID http://orcid.org/0000-0003-0370-4567
Michael B ShermanDepartment of Biochemistry and Molecular Biology, Sealy Center for structural Biology and Molecular Biophysics, The University of Texas Medical Branch at Galveston, Galveston, TX, USA.ORCID http://orcid.org/0000-0002-3680-8066
Johan PaulssonDepartment of Systems Biology, Blavatnik Institute, Harvard Medical School, Boston, MA, USA.ORCID http://orcid.org/0000-0002-8671-4914
Mandar T NaikDepartment of Molecular Biology, Cell Biology and Biochemistry, Brown University, Providence, RI, USA.ORCID http://orcid.org/0000-0002-7016-572X
Paul P SotiriadisDepartment of Electrical and Computer Engineering, National Technical University of Athens, Athens, Greece.
Eleftherios MylonakisDepartment of Medicine, Houston Methodist Hospital, Houston, TX, USA. emylonakis@houstonmethodist.org.ORCID http://orcid.org/0000-0002-4624-0777

Funding

Technical Mother Machine CoreP01AI083214 · NIAID · SCHEPENS EYE RESEARCH INSTITUTE · PI David C Hooper · 2009 to 2026
$39.4M
Using Genomic Epidemiology to Identify Transmission Patterns and Inform Intervention Strategies for Antibiotic-Resistant N. GonorrhoeaeP20GM121344 · NIGMS · MIRIAM HOSPITAL · PI FREDERICKS, ALGER M · 2018 to 2022
$9.4M
U.S. Department of Health & Human Services | NIH | National Institute of Allergy and Infectious Diseases (NIAID) P01AI083214U.S. Department of Health & Human Services | NIH | National Institute of General Medical Sciences (NIGMS) P20GM121344
6 · The paper itself

Abstract

Developing short, stable, and potent antimicrobial peptides is a promising strategy to combat antibiotic resistance and persistence. We present CAMPER (Constraint-driven AMP Engineering with Ranking), a mechanistic artificial intelligence framework that integrates machine learning with biophysical ranking to prioritize membrane-targeting peptides effective against persister and biofilm forms of methicillin-resistant Staphylococcus aureus. We apply CAMPER to identify WP-CAMPER1 (12mer) that kills S. aureus MW2 at a minimal inhibitory concentration of 4 µg/mL. A 2% topical WP-CAMPER1 formulation reduces S. aureus MW2 burden by 2.5 log

Indexed as

Anti-Bacterial AgentsAntimicrobial PeptidesArtificial IntelligenceMethicillin-Resistant Staphylococcus aureusPeptidesAnimalsBiofilmsDrug DesignFemaleHumansMiceMicrobial Sensitivity TestsStaphylococcal InfectionsAnti-Bacterial AgentsAntimicrobial PeptidesPeptides

Identifiers

PMID41803147
PMCPMC13100222

What OpenQuestion holds

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LicenceCC BY-NC-ND
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.