Evidence map›Paper›PMID 41803129›Full record

ArticleNature communications2026

Distinct genomic trajectory among invasive Salmonella Typhimurium ST313 infections.

Chenghao Jia, Haiyang Zhou, Qianzhe Cao, Chenghu Huang, Hongli An, Yan Li, Lefu Lan, Min Yue

Abstract read
In one paragraph

Article in Nature communications, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. ZoonoticEmerging microbes & infections · 2026
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Chenghao Jia *School of Pharmaceutical Science and Technology, Hangzhou Institute of Advanced Study, Hangzhou, China.ORCID http://orcid.org/0000-0003-4406-9213
Haiyang Zhou *Department of Veterinary Medicine, Zhejiang University College of Animal Sciences, Hangzhou, China.
Qianzhe CaoDepartment of Veterinary Medicine, Zhejiang University College of Animal Sciences, Hangzhou, China.
Chenghu HuangDepartment of Veterinary Medicine, Zhejiang University College of Animal Sciences, Hangzhou, China.
Hongli AnDepartment of Veterinary Medicine, Zhejiang University College of Animal Sciences, Hangzhou, China.
Yan LiDepartment of Veterinary Medicine, Zhejiang University College of Animal Sciences, Hangzhou, China.
Lefu LanSchool of Pharmaceutical Science and Technology, Hangzhou Institute of Advanced Study, Hangzhou, China.
Min YueKey Laboratory of Systems Health Science of Zhejiang Province, School of Life Science, Hangzhou Institute for Advanced Study, University of Chinese Academy of Sciences, Hangzhou, China. myue@ucas.ac.cn.ORCID http://orcid.org/0000-0002-6787-0794

Funding

Natural Science Foundation of Zhejiang Province (Zhejiang Provincial Natural Science Foundation) LZ24C180002
6 · The paper itself

Abstract

Invasive non-typhoidal Salmonella (iNTS) disease, primarily manifesting as bloodstream infections and dominated by Salmonella Typhimurium sequence type 313 (ST313), represents a major global health challenge, particularly in sub-Saharan Africa. However, the transmission landscape and evolutionary driver of ST313 remain incompletely understood. Here, we compile the global dataset to date, comprising 11,361 human-derived iNTS genomes and 3115 ST313 genomes from diverse sources, enabling identification of a highly antimicrobial-resistant sublineage 2.4 and an emerging lineage 4. Phylogenomic analyses reveal patterns consistent with intercontinental dissemination of ST313, which may be associated with modernized human biomass movement. Sublineage 2.4, an antimicrobial-resistant offshoot that displaced lineage 1, harbors extended-spectrum β-lactamase genes, including bla

Indexed as

Genome, BacterialSalmonella InfectionsSalmonella typhimuriumAnti-Bacterial Agentsbeta-LactamasesEvolution, MolecularGenomicsHumansPhylogenyAnti-Bacterial Agentsbeta-Lactamases

Identifiers

PMID41803129
PMCPMC13100060

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.