Evidence map›Paper›PMID 41800173›Full record

ArticleHuman mutation2026

GGPS1 Promoter Variant (rs3806394) Is Associated With Larger Simple Renal Cysts via Reduced GGPPS Expression.

Kai Wang, Tianzhen Tang, Tao Xu, Zhen Chen, Liming Gou, Yuqi Wang, Dong Wang, Jing Wu, Xiuxing Wang, Bin Xue and 1 more

Abstract read
In one paragraph

Article in Human mutation, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Kai WangDepartment of Urology, Sir Run Run Hospital, Nanjing Medical University, Nanjing, Jiangsu Province, China, njmu.edu.cn.
Tianzhen TangDepartment of Nephrology, State Key Laboratory of Reproductive Medicine, Children's Hospital of Nanjing Medical University, Nanjing, Jiangsu Province, China.
Tao XuDepartment of Nephrology, State Key Laboratory of Reproductive Medicine, Children's Hospital of Nanjing Medical University, Nanjing, Jiangsu Province, China.
Zhen ChenDepartment of Urology, The Third Affiliated Hospital of Soochow University, Changzhou, Jiangsu Province, China, suda.edu.cn.
Liming GouDepartment of Nephrology, State Key Laboratory of Reproductive Medicine, Children's Hospital of Nanjing Medical University, Nanjing, Jiangsu Province, China.
Yuqi WangDepartment of Nephrology, State Key Laboratory of Reproductive Medicine, Children's Hospital of Nanjing Medical University, Nanjing, Jiangsu Province, China.
Dong WangDepartment of Urology, Sir Run Run Hospital, Nanjing Medical University, Nanjing, Jiangsu Province, China, njmu.edu.cn.
Jing WuDepartment of Nephrology, State Key Laboratory of Reproductive Medicine, Children's Hospital of Nanjing Medical University, Nanjing, Jiangsu Province, China.ORCID https://orcid.org/0000-0001-9550-4380
Xiuxing WangInstitute for Brain Tumors, Jiangsu Provincial Key Laboratory of Cancer Biomarkers, Prevention and Treatment, Collaborative Innovation Center for Cancer Personalized Medicine, Nanjing Medical University, Nanjing, Jiangsu Province, China, njmu.edu.cn.ORCID https://orcid.org/0000-0001-7115-729X
Bin XueDepartment of Nephrology, State Key Laboratory of Reproductive Medicine, Children's Hospital of Nanjing Medical University, Nanjing, Jiangsu Province, China.ORCID https://orcid.org/0000-0002-2713-2156
Xianlin XuDepartment of Urology, Sir Run Run Hospital, Nanjing Medical University, Nanjing, Jiangsu Province, China, njmu.edu.cn.ORCID https://orcid.org/0000-0002-4422-6832

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Objective: We are aimed at investigating the association between the size of simple renal cyst (SRC) and the expression of geranylgeranyl pyrophosphate synthase (GGPPS), which can induce renal cyst formation after its deletion. Methods: Seventy-seven patients who received renal cyst decortication were enrolled. Clinical characteristics and tissue sections were collected. We used immunohistochemistry and immunofluorescence to detect the expression and location of GGPPS in SRC tissues. The relationship between GGPPS expression and renal cyst size was evaluated by multivariate linear regression analysis. The tagging SNPs located in GGPS1 promoter were identified and the effect of the rs3806394 locus variant on GGPS1 promoter activity was assessed. Results: Immunohistochemistry and Western blot analysis revealed that GGPPS expression was downregulated in SRC tissues and that the larger the renal cyst volume was, the lower the expression of GGPPS in the cyst lining epithelial. Multivariate linear regression analysis indicated that low GGPPS levels in SRCs were independently related to large SRC size. Additionally, we reported that the frequency of the rs3806394 variant located in the GGPS1 promoter increased in SRC patients. The variant of the rs3806394 locus could decrease the activity of the GGPS1 promoter. Conclusion: A reduction in GGPPS expression in the cyst lining epithelium was associated with a risk of larger SRC size. The variant of the rs3806394 locus may be one of the reasons for the differential GGPPS expression in SRC tissues among the patients. These findings offer novel insights into the pathological mechanisms of SRC development.

Indexed as

FarnesyltranstransferaseGeranyltranstransferaseKidney Diseases, CysticPolymorphism, Single NucleotidePromoter Regions, GeneticAdultFemaleGenetic Association StudiesGenetic Predisposition to DiseaseHumansMaleMiddle AgedFarnesyltranstransferaseGeranyltranstransferasegeranylgeranyl pyrophosphate synthaseggps1rs3806394simple renal cystsSNPs

Identifiers

PMID41800173
PMCPMC12961355

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.