Evidence map›Paper›PMID 41797715›Full record

ArticleJCI insight2026

Lysine-specific histone demethylase 1a regulates nephron development and long-term transcriptional programming.

Nicola Wanner, Julia Keller, Nastassia Liaukouskaya, Geoffroy Andrieux, Sandra D Laufer, Manuel Rogg, Tillmann Bork, Wei Liang, Fabian Braun, Fabian Haas and 12 more

Abstract read
In one paragraph

Article in JCI insight, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

22 authors.

Nicola WannerIII. Department of Medicine and.
Julia KellerDepartment of Medicine IV, Faculty of Medicine, University of Freiburg, Germany.
Nastassia LiaukouskayaIII. Department of Medicine and.
Geoffroy AndrieuxInstitute of Medical Bioinformatics and Systems Medicine and.
Sandra D LauferIII. Department of Medicine and.
Manuel RoggInstitute of Surgical Pathology, Faculty of Medicine, Medical Center - University of Freiburg, Freiburg, Germany.
Tillmann BorkDepartment of Medicine IV, Faculty of Medicine, University of Freiburg, Germany.
Wei LiangDepartment of Medicine IV, Faculty of Medicine, University of Freiburg, Germany.
Fabian BraunIII. Department of Medicine and.
Fabian HaasIII. Department of Medicine and.
Milagros N WongIII. Department of Medicine and.
Victor G PuellesIII. Department of Medicine and.
Sydney E GiesIII. Department of Medicine and.
Charlotte MeyerDepartment of Medicine IV, Faculty of Medicine, University of Freiburg, Germany.
Melanie BoerriesInstitute of Medical Bioinformatics and Systems Medicine and.
Martin HelmstädterDepartment of Medicine IV, Faculty of Medicine, University of Freiburg, Germany.
Oliver KretzIII. Department of Medicine and.
Iris HildDepartment of Medicine IV, Faculty of Medicine, University of Freiburg, Germany.
Eric MetzgerGerman Cancer Consortium (DKTK), Partner site Freiburg, a partnership between DKFZ and Medical Center, University of Freiburg, Freiburg, Germany.
Roland SchüleDepartment of Urology, University Freiburg Medical Center, Freiburg, Germany.
Wibke Bechtel-WalzDepartment of Medicine IV, Faculty of Medicine, University of Freiburg, Germany.
Tobias B HuberIII. Department of Medicine and.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Low nephron endowment constitutes a risk factor for hypertension and renal disease. Epigenetic regulation is crucial for nephron progenitor cell differentiation, affecting nephron number and renal function. The role of many epigenetic modulators, such as Lysine-specific histone demethylase 1a (LSD1 or KDM1A), remains unclear. We used Kdm1a-KO mice to demonstrate that Kdm1a depletion in nephron progenitor cells results in reduced kidney size in neonates and led to glomerulosclerosis, proteinuria, and renal cysts in adults. Notably, Kdm1a deletion in podocytes or tubular cells did not replicate these effects. CRISPR/Cas9-mediated KDM1A deletion in human kidney organoids caused cyst formation and altered gene expression, with snRNA-seq revealing downregulation of podocyte genes and upregulation of metabolic genes. The presence of noncoding RNAs indicated roles in cell proliferation. Our study reveals the critical role of Kdm1a function in nephron development and highlights its affect on transcriptional programming for long-term renal function and susceptibility to cyst formation.

Indexed as

Histone DemethylasesNephronsAnimalsCell DifferentiationCell ProliferationEpigenesis, GeneticGene Expression Regulation, DevelopmentalHumansMaleMiceMice, KnockoutPodocytesStem CellsHistone DemethylasesKDM1A protein, humanKDM1a protein, mouseChronic kidney diseaseDevelopmentEpigeneticsNephrology

Identifiers

PMID41797715
PMCPMC13041676

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.