ArticleGlycobiology2026
Resources for screening the literature for glycan-related terms using PubAnnotation in GlyCosmos.
Article in Glycobiology, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.
What it found
Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.
The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.
The trial behind it
Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.
Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.
Who cites it
0 citing papers in PubMed.
No citing paper in PubMed yet.
Corrections and comments
PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.
Authors and funding
4 authors.
Funding
Abstract
To facilitate access to relevant text of literature related to data in GlyCosmos, we have developed a collection of annotated literature resources using the agile annotation method supported by the PubAnnotation system. As a proof of concept, we compiled two dictionaries for glycan motifs and epitopes, plus six additional dictionaries for relevant biological entities, covering organisms, phenotypes, diseases, and anatomical locations. Next, we collected all the PubMed abstracts from 15 selected journals, and annotated them based on these eight dictionaries. This resulted in 279,368 annotation instances made to 15,463 abstracts, meaning that we were able to automatically pull glycan motif and epitope annotations related to diseases, taxonomy, etc. from over 15,000 abstracts. All the annotations were converted into Resource Description Framework (RDF) statements to support flexible querying. For users who are not familiar with RDF, we also developed a Web interface in GlyCosmos to visualize the location of the text in publications as well as query templates to personalize queries for specific terms. Pilot searches and analyses suggest that these resources are useful for navigation of relevant contexts of biomedical associations relevant to glycobiology.
Indexed as
Identifiers
What OpenQuestion holds
Registered trials
Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.