Evidence map›Paper›PMID 41792122›Full record

ArticleNature communications2026

Mechanisms of gene regulation by SRCAP and H2A.Z.

Armelle Tollenaere, Enes Ugur, Susanna Dalla Longa, Cédric Deluz, Devin Assenheimer, J Christof M Gebhardt, Heinrich Leonhardt, David M Suter

Abstract read
In one paragraph

Article in Nature communications, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Armelle TollenaereEcole Polytechnique Fédérale de Lausanne, School of Life Sciences, Institute of Bioengineering, Lausanne, Switzerland. armelle.tollenaere@epfl.ch.ORCID http://orcid.org/0009-0008-2064-0239
Enes Ugur *Department of Proteomics and Signal Transduction, Max-Planck Institute of Biochemistry, Martinsried, Germany.
Susanna Dalla Longa *Institute of Experimental Physics and IQST, Ulm University, Albert-Einstein-Allee 11, Ulm, Germany.
Cédric DeluzEcole Polytechnique Fédérale de Lausanne, School of Life Sciences, Institute of Bioengineering, Lausanne, Switzerland.
Devin AssenheimerInstitute of Experimental Physics and IQST, Ulm University, Albert-Einstein-Allee 11, Ulm, Germany.
J Christof M GebhardtInstitute of Experimental Physics and IQST, Ulm University, Albert-Einstein-Allee 11, Ulm, Germany.ORCID http://orcid.org/0000-0003-1900-600X
Heinrich LeonhardtFaculty of Biology and Center for Molecular Biosystems (BioSysM), Human Biology and BioImaging, Ludwig-Maximilians-Universität München, Munich, Germany.ORCID http://orcid.org/0000-0002-5086-6449
David M SuterEcole Polytechnique Fédérale de Lausanne, School of Life Sciences, Institute of Bioengineering, Lausanne, Switzerland. david.suter@epfl.ch.ORCID http://orcid.org/0000-0001-5644-4899

Funding

Deutsche Forschungsgemeinschaft (German Research Foundation) 213249687 - SFB1064Deutsche Forschungsgemeinschaft (German Research Foundation) 468578170Deutsche Forschungsgemeinschaft (German Research Foundation) CRC 1506 C05 no. 450627322Schweizerischer Nationalfonds zur Förderung der Wissenschaftlichen Forschung (Swiss National Science Foundation) grant# 310030_212197
6 · The paper itself

Abstract

Discriminating regulatory functions of chromatin composition from those of chromatin-modifying complexes is a central problem in gene regulation. This question remains unexplored in the context of histone variants and their dedicated chromatin remodelers. Here we dissect the distinct and cell cycle-dependent functions of Snf2 Related CREBBP Activator Protein (SRCAP) and H2A.Z in gene regulation of pluripotent stem cells. Using acute degradation of endogenous SRCAP, we uncover dynamic changes of H2A.Z occupancy and continuous requirement of SRCAP over the cell cycle. We also engineered an SRCAP mutant, defective for H2A.Z deposition, allowing us to distinguish H2A.Z-dependent and independent functions of SRCAP. We discover that SRCAP exhibits essential H2A.Z-independent functions in inhibiting DNA binding of dozens of pioneer transcription factors at enhancers by steric hindrance. In contrast, H2A.Z acts mainly as a transcriptional repressor gatekeeping the expression of lineage-specific genes. Our study establishes the catalytic-independent role of a chromatin remodeler in broadly regulating transcription factor binding, and demonstrates how a chromatin remodeler-histone variant pair orchestrates transcription to maintain self-renewal and plasticity of pluripotent stem cells.

Indexed as

Gene Expression RegulationHistonesAdenosine TriphosphatasesAnimalsCell CycleChromatinChromatin Assembly and DisassemblyHumansMicePluripotent Stem CellsTranscription FactorsAdenosine TriphosphatasesChromatinH2az1 protein, mouseHistonesSRCAP protein, humanTranscription Factors

Identifiers

PMID41792122
PMCPMC13087030

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.