Evidence map›Paper›PMID 41788791›Full record

ArticleFoundations of data science (Springfield, Mo.)2025

PERSISTENT INTERACTION TOPOLOGY IN DATA ANALYSIS.

Jian Liu, Dong Chen, Guo-Wei Wei

Abstract read
In one paragraph

Article in Foundations of data science (Springfield, Mo.), 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Review
  6. Persistent Topological Laplacians-A Survey.Mathematics (Basel, Switzerland) · 2025
    Article
  7. Evolutionary Khovanov homology.AIMS mathematics · 2024
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Jian LiuMathematical Science Research Center, Chongqing University of Technology, Chongqing 400054, China.
Dong ChenDepartment of Mathematics, Michigan State University, MI 48824, USA.
Guo-Wei WeiDepartment of Mathematics, Michigan State University, MI 48824, USA.

Funding

AI-based platform for predicting emerging vaccine-escape variants and designing mutation-proof antibodiesR01AI164266 · NIAID · UNIVERSITY OF GEORGIA · PI Guowei Wei, YONG-HUI ZHENG · 2022 to 2026
$2.7M
Discovery-Driven Mathematics and Artificial Intelligence for Biosciences and Drug DiscoveryR35GM148196 · NIGMS · UNIVERSITY OF GEORGIA · PI Guowei Wei · 2023 to 2026
$1.5M
Synergistic integration of topology and machine learning for the predictions of protein-ligand binding affinities and mutation impactsR01GM126189 · NIGMS · MICHIGAN STATE UNIVERSITY · PI WEI, GUOWEI · 2018 to 2021
$1.4M
NIAID NIH HHS R01 AI164266NIGMS NIH HHS R01 GM126189NIGMS NIH HHS R35 GM148196
6 · The paper itself

Abstract

Topological data analysis, as a tool for extracting topological features and characterizing geometric shapes, has had tremendous success across diverse fields. Its key mathematical techniques include persistent homology and the recently developed persistent Laplacians. However, classic mathematical models like simplicial complexes often struggle to provide a localized topological description for interactions or individual elements within a complex system involving a specific set of elements. In this work, we introduce persistent interaction homology and persistent interaction Laplacian that emphasize individual interacting elements in the system. We demonstrate the stability of persistent interaction homology as a persistent module. Furthermore, for a finite discrete set of points in the Euclidean space, we provide the construction of persistent interaction Vietoris-Rips complexes and compute their interaction homology and interaction Laplacians. The proposed methods hold significant promise for analyzing heterogeneously interactive data and emphasizing specific elements in data. Their utility for data science is demonstrated with applications to molecules.

Indexed as

interaction homologyinteraction Laplacianinteraction Vietoris-Rips complexPrimary: 55N31Secondary: 62R40, 68T09Topological data analysistopological persistence

Identifiers

PMID41788791
PMCPMC12959482

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.