Evidence map›Paper›PMID 41788053›Full record

ArticleGenetics2026

CartograPlant: bridging genomic, phenotypic, and environmental data to advance plant resilience and eco-evolutionary insight.

Brandon M Lind, Irene Cobo-Simón, Meghan Myles, Gabe Barrett, Emily Grau, Risharde Ramnath, Vlad Savitsky, Jill L Wegrzyn

Abstract read
In one paragraph

Article in Genetics, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Brandon M LindDepartment of Ecology and Evolutionary Biology, University of Connecticut, Storrs, CT 06269, United States.ORCID 0000-0002-8560-5417
Irene Cobo-SimónDepartment of Ecology and Evolutionary Biology, University of Connecticut, Storrs, CT 06269, United States.ORCID 0000-0002-7648-7471
Meghan MylesDepartment of Ecology and Evolutionary Biology, University of Connecticut, Storrs, CT 06269, United States.
Gabe BarrettDepartment of Ecology and Evolutionary Biology, University of Connecticut, Storrs, CT 06269, United States.
Emily GrauDepartment of Ecology and Evolutionary Biology, University of Connecticut, Storrs, CT 06269, United States.
Risharde RamnathDepartment of Ecology and Evolutionary Biology, University of Connecticut, Storrs, CT 06269, United States.
Vlad SavitskyDepartment of Ecology and Evolutionary Biology, University of Connecticut, Storrs, CT 06269, United States.
Jill L WegrzynDepartment of Ecology and Evolutionary Biology, University of Connecticut, Storrs, CT 06269, United States.ORCID 0000-0001-5923-0888

Funding

Agricultural Genome to Phenome Initiative #2020-70412-32615Agricultural Genome to Phenome Initiative #2021-70412-35233Agricultural Genome to Phenome Initiative #2022-70412-38454National Institute of Food and AgricultureNSF BII 2320675the Trees In Peril Project funded by the Nature ConservancyUSDA NIFA #2024-51181-43233USDA NIFA FACT #2019-67021-29920U.S. Department of Agriculture (USDA)
6 · The paper itself

Abstract

Climate change is threatening plant health and productivity at all spatial scales, and these impacts are further compounded by the rising incidence of invasive pests and pathogens. Effectively addressing these challenges requires a comprehensive understanding of plant demography as well as the mechanisms and drivers of adaptation. Achieving this understanding requires the integration of physiological, ecological, and genetic datasets. However, such integration is often hindered by disconnected data sources, inconsistent metadata standards, and limited tools to link, analyze, and visualize multi-dimensional datasets in a unified framework. Addressing these hurdles is critical to advancing the understanding of species responses to environmental change and developing informed strategies for conservation, restoration, and adaptive management. CartograPlant (https://cartograplant.org) is a web-based interactive application which facilitates the visualization and analysis of genotypic, phenotypic, and environmental data, as well as associated metadata, from georeferenced individuals. Developed as a Tripal module, CartograPlant addresses a critical gap in biological data integration by enabling users to explore complex eco-evolutionary patterns across space and time. Recent updates have expanded its data sources, improved interoperability, and introduced NextFlow pipelines alongside new tools for the integration and analysis of these data. CartograPlant offers a scaleable, flexible, and continually updated platform for researchers, conservationists, land managers, and plant breeders to better understand and mitigate the impacts of global change on plant biodiversity, accelerate resilience in breeding programs, and inform data-driven decisions in agriculture and ecosystem management.

Indexed as

Biological EvolutionGenomicsPlantsSoftwareClimate ChangeGenome, PlantPhenotypebiodiversity informaticsdata integrationdata interoperabilityFAIRGEAGWASmeta-analysisplant adaptation

Identifiers

PMID41788053
PMCPMC13050189

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.