Evidence map›Paper›PMID 41787271›Full record

ArticleBMC genomics2026

The bHLH transcription factor OsbHLH148 negatively regulates rice tiller number and grain yield through an integrated transcriptional network.

Xinyu Chen, Binfeng Dai, Yuchen Zhou, Ji'an Bi, Chengqi Yan, Liequan Zhong, Yuhang Zhou, Liujie Xie, Bingsong Zheng, Chulang Yu and 2 more

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Article in BMC genomics, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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5 · Who and what money

Authors and funding

12 authors.

Xinyu Chen *College of Plant Protection, Shenyang Agricultural University, Shenyang, 110000, China.
Binfeng Dai *Taizhou Agroecological Protection and Quality Safety Center, Taizhou, 318000, China.
Yuchen Zhou *Shaoxing Grain and Oil Crop Technology Extension Center, Shaoxing, 321000, China.
Ji'an BiInstitute of Biotechnology, Ningbo Academy of Agricultural Sciences, Ningbo, 315040, China.
Chengqi YanNingbo Modern College of Agriculture, Ningbo, 315100, China.
Liequan ZhongTaizhou Agroecological Protection and Quality Safety Center, Taizhou, 318000, China.
Yuhang ZhouState Key Laboratory for Quality and Safety of Agro-Products, Key Laboratory of Biotechnology in Plant Protection of MARA, Key Laboratory of Green Plant Protection of Zhejiang Province, Zhejiang-UK Joint Laboratory on Soil Health and Agri-Product Safety, Institute of Virology and Biotechnology, Zhejiang Academy of Agricultural Science, Hangzhou, 310021, China.
Liujie XieTaizhou Academy of Agricultural Science, Taizhou, 318000, China.
Bingsong ZhengNational Key Laboratory for Development and Utilization of Forest Food Resources, Zhejiang A&F University, Hangzhou, 311300, China.
Chulang YuState Key Laboratory for Quality and Safety of Agro-Products, Key Laboratory of Biotechnology in Plant Protection of MARA, Key Laboratory of Green Plant Protection of Zhejiang Province, Institute of Plant Virology, Ningbo University, Ningbo, 315211, China. yuchulang@163.com.
Jianping ChenState Key Laboratory for Quality and Safety of Agro-Products, Key Laboratory of Biotechnology in Plant Protection of MARA, Key Laboratory of Green Plant Protection of Zhejiang Province, Institute of Plant Virology, Ningbo University, Ningbo, 315211, China. jianpingchen@nbu.edu.cn.
Yong YangState Key Laboratory for Quality and Safety of Agro-Products, Key Laboratory of Biotechnology in Plant Protection of MARA, Key Laboratory of Green Plant Protection of Zhejiang Province, Zhejiang-UK Joint Laboratory on Soil Health and Agri-Product Safety, Institute of Virology and Biotechnology, Zhejiang Academy of Agricultural Science, Hangzhou, 310021, China. yangyong@zaas.ac.cn.

Funding

National Key Research and Development Program of China 2024YFD2300500Ningbo Major Research and Development Plan Project 2023Z124the Basic Public Welfare Research Project of Zhejiang Province LTGN24C130002the National Natural Science Foundation of China 32572293the National Natural Science Foundation of China for Young Scholars 31101208the Taizhou Agricultural Science and Technology Project 2023TZNY03Zhejiang Academy of Agricultural Sciences and Shaoxing City Cooperation Project ZJTY2024-N-280
6 · The paper itself

Abstract

backgroundRice is a staple food crop worldwide, and the number of tillers per plant is an important agronomic trait influencing grain yield. Consequently, investigating the molecular mechanisms regulating rice tillering is of great significance.

resultsThis study systematically elucidated the biological function of the rice transcription factor OsbHLH148 in regulating tillering and yield formation. Through the generation of OsbHLH148-overexpressing transgenic lines, we observed a dwarf plant phenotype accompanied by a significant reduction in tiller number and a decrease of approximately 72% in grain yield per plant. OsbHLH148 protein was localized to both the cytoplasm and nucleus and exhibited a transcriptional activation activity. Integrated multi-omics analyses-including RNA sequencing (RNA-Seq), weighted gene co-expression network analysis (WGCNA), and DNA affinity purification sequencing (DAP-Seq), revealed that OsbHLH148 modulates a gene network associated with protein phosphorylation, Mitogen-activated protein kinase (MAPK) signaling, and secondary metabolite biosynthesis, thereby influencing tiller development. Furthermore, we identified and validated its direct target genes, such as MYB110, OsDREB1A, RLCK174, OsCIPK23, and MRLK26.

conclusionsThese findings suggest that OsbHLH148 may inhibit rice tillering by regulating potential target genes involved in hormone signaling pathways (such as auxin and gibberellin), calcium signaling, and carbon and nitrogen metabolism. This study offers potential applications of these genes for improving rice yield and provides valuable genetic resources as well as a theoretical basis for molecular design breeding aimed at modifying plant architecture and enhancing productivity.

Indexed as

Basic Helix-Loop-Helix ProteinsEdible GrainGene Regulatory NetworksOryzaPlant ProteinsGene Expression ProfilingGene Expression Regulation, PlantPlants, Genetically ModifiedBasic Helix-Loop-Helix ProteinsPlant ProteinsMulti-omics analysisRegulatory networkRice tilleringTarget genesTranscription factorsYield

Identifiers

PMID41787271
PMCPMC13077820

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.