Evidence map›Paper›PMID 41779042›Full record

ArticleVirchows Archiv : an international journal of pathology2026

Immunohistochemical expression of GPNMB in TFEB-rearranged and TFEB-amplified renal cell carcinomas.

Kristyna Pivovarcikova, Petr Grossmann, Petr Steiner, Levente Kuthi, Joanna Rogala, Kiril Trpkov, Jose Ignacio Lopez, Boris Rychly, Lucia Sarvaicova, Zuzana Spurkova and 13 more

Abstract read
In one paragraph

Article in Virchows Archiv : an international journal of pathology, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

23 authors.

Kristyna PivovarcikovaŠikl's Department of Pathology, Faculty of Medicine and University Hospital in Pilsen, Charles University, Pilsen, Czech Republic. pivovarcikovak@fnplzen.cz.ORCID http://orcid.org/0000-0002-9553-0105
Petr GrossmannŠikl's Department of Pathology, Faculty of Medicine and University Hospital in Pilsen, Charles University, Pilsen, Czech Republic.
Petr SteinerŠikl's Department of Pathology, Faculty of Medicine and University Hospital in Pilsen, Charles University, Pilsen, Czech Republic.
Levente KuthiDepartment of Surgical and Molecular Pathology, Tumor Pathology Center, National Institute of Oncology, Budapest, Hungary.
Joanna RogalaDepartment of Pathology, Regional Specialist Hospital, Wroclaw, Wroclaw, Poland.
Kiril TrpkovDiagnostic and Molecular Pathology, Alberta Precision Laboratories and University of Calgary, Calgary, AB, Canada.
Jose Ignacio LopezBiobizkaia Health Research Institute, Barakaldo, Spain.
Boris RychlyDiagnostic Pathology Centre, Unilabs Slovakia Ltd, Bratislava, Slovakia.
Lucia SarvaicovaDepartment of Pathology, Faculty Hospital, Trnava, Slovakia.
Zuzana SpurkovaDepartment of Pathology, Bulovka University Hospital, Prague, Czech Republic.
Ondrej NikolovDepartment of Pathology, Hospital Ceske Budejovice, Ceske Budejovice, Czech Republic.
Ales MlynekDepartment of Pathology, City Hospital Ostrava, Ostrava, Czech Republic.
Jiri SoukupDepartment of Pathology, Military University Hospital, Prague, Czech Republic.
Eva SehnalkovaDepartment of Pathology, Silesian Hospital, Opava, Czech Republic.
Ludek BaumbrukDepartment of Pathology, Regional Hospital Pribram a.S., Příbram, Czech Republic.
Josef SkopalŠikl's Department of Pathology, Faculty of Medicine and University Hospital in Pilsen, Charles University, Pilsen, Czech Republic.
Petr StranskyDepartment of Urology, Faculty of Medicine and University Hospital in Pilsen, Charles University, Pilsen, Czech Republic.
Adriena Bartos-VeselaDepartment of Urology, Faculty of Medicine and University Hospital in Pilsen, Charles University, Pilsen, Czech Republic.
Tomas PitraDepartment of Urology, Faculty of Medicine and University Hospital in Pilsen, Charles University, Pilsen, Czech Republic.
Milan HoraDepartment of Urology, Faculty of Medicine and University Hospital in Pilsen, Charles University, Pilsen, Czech Republic.
Michal MichalŠikl's Department of Pathology, Faculty of Medicine and University Hospital in Pilsen, Charles University, Pilsen, Czech Republic.
Ondrej OndicŠikl's Department of Pathology, Faculty of Medicine and University Hospital in Pilsen, Charles University, Pilsen, Czech Republic.
Reza AlaghehbandanRobert J. Tomsich Pathology and Laboratory Medicine Institute, Department of Anatomic Pathology, Cleveland Clinic, Cleveland, OH, USA.

Funding

Cooperatio Program research area SURGInstitutional Research Fund FN 00669806
6 · The paper itself

Abstract

TFEB-altered renal cell carcinomas (RCCs) display a wide range of morphological features and variable immunohistochemical profiles, often overlapping with other RCC subtypes. This variability poses significant diagnostic challenges. Consequently, there is an ongoing search for reliable ancillary tests that can aid in identifying cases that warrant molecular testing. In this study, we focused on GPNMB immunohistochemistry expression in TFEB-rearranged and TFEB-amplified RCCs. A total of 25 TFEB-altered RCCs, including 16 TFEB-amplified RCCs and nine TFEB-rearranged RCCs, were included in the study. GPNMB immunohistochemistry was positive in all nine TFEB-rearranged RCCs, demonstrating strong, diffuse cytoplasmic staining. In the TFEB-amplified RCC cohort, GPNMB expression was also detected in all 16 tumors; however, the staining pattern differed from that seen in TFEB-rearranged RCCs. Diffuse staining was observed in eight tumors (50%), four of which showed variable staining intensity, while the remaining eight tumors (50%) exhibited focal GPNMB reactivity, with intervening negative areas. GPNMB was therefore positive in all 25/25 (100%) TFEB-altered RCCs by IHC, supporting its potential role as a sensitive screening marker for such RCCs. TFEB-rearranged RCCs typically exhibited strong, diffuse GPNMB immunoreactivity, whereas TFEB-amplified RCCs more often showed patchy or focal staining of lower intensity, interspersed with areas of GPNMB negativity. Variability of staining in TFEB-amplified RCCs underscores the need for cautious interpretation, particularly in limited biopsy specimens, taking into account the morphologic findings and other immunohistochemistry stains, such as Melan A and Cathepsin K.

Indexed as

Basic Helix-Loop-Helix Leucine Zipper Transcription FactorsBiomarkers, TumorCarcinoma, Renal CellGene RearrangementKidney NeoplasmsMembrane GlycoproteinsAdultAgedFemaleGene AmplificationHumansImmunohistochemistryMaleMiddle AgedBasic Helix-Loop-Helix Leucine Zipper Transcription FactorsBiomarkers, TumorGPNMB protein, humanMembrane GlycoproteinsTFEB protein, humanGPNMBImmunohistochemistryTFEB-altered renal cell carcinomaTFEB-amplified renal cell carcinomaTFEB-rearranged renal cell carcinoma

Identifiers

PMID41779042
PMCPMC13582045

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.