Evidence map›Paper›PMID 41774378›Full record

ArticleAnnals of biomedical engineering2026

Improving In Silico Cardiac Safety Prediction by Consensus Averaging of Transmural Ventricular Cell Models.

Nurul Qashri Mahardika T, Ali Ikhsanul Qauli, Yunendah Nur Fuadah, Aulia Khamas Heikhmakhtiar, Muhammad Adnan Pramudito, Ariyadi, Aroli Marcellinus, Yoo Seok Kim, Ki Moo Lim

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Article in Annals of biomedical engineering, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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9 authors.

Nurul Qashri Mahardika TComputational Medicine Lab, Department of IT Convergence Engineering, Kumoh National Institute of Technology, Gumi, 39177, Republic of Korea.
Ali Ikhsanul QauliFaculty of Advanced Technology and Multidiscipline Department of Engineering, Robotics, Mechatronics, and Intelligent System Research Group, Universitas Airlangga, Surabaya, Indonesia.
Yunendah Nur FuadahTelecommunication Engineering Study Program, School of Electrical Engineering, Telkom University, Jl, Bandung, Telekomunikasi No. 1, West Java, 40257, Indonesia.
Aulia Khamas HeikhmakhtiarDepartment of Informatics, Universitas Pertahanan, Bogor, Indonesia.
Muhammad Adnan PramuditoComputational Medicine Lab, Department of IT Convergence Engineering, Kumoh National Institute of Technology, Gumi, 39177, Republic of Korea.
AriyadiComputational Medicine Lab, Department of IT Convergence Engineering, Kumoh National Institute of Technology, Gumi, 39177, Republic of Korea.
Aroli MarcellinusComputational Medicine Lab, Department of IT Convergence Engineering, Kumoh National Institute of Technology, Gumi, 39177, Republic of Korea.
Yoo Seok KimDepartment of Biomedical Engineering, Keimyung College University, Daegu, 42601, Republic of Korea.
Ki Moo LimComputational Medicine Lab, Department of IT Convergence Engineering, Kumoh National Institute of Technology, Gumi, 39177, Republic of Korea. kmlimphd@gmail.com.

Funding

Korea Innovation Foundation(INNOPOLIS) grant funded by the Korea government(MSIT) RS-2025-04003017Ministry of Science and the Institute of Information & Communications Technology Planning & Evaluation(IITP)-Innovative Human Resource Development for Local Intellectualization program grant funded by the Korea government(MSIT) IITP-2025-RS-2020-II201612National Research Foundation of Korea under the Basic Science Research Program 2022R1A2C2006326the regional innovation system & education (RISE)-(Regional Growth Innovation LAB) program through the Gyeongbuk RISE Center, funded by the Ministry of Education (MOE) and the Gyeongsangbuk-do, Republic of Korea 2025-rise-15-105
6 · The paper itself

Abstract

purposeEstablished in silico frameworks for assessing Torsade de Pointes (TdP) risk primarily rely on single-cell electrophysiological biomarkers, which have demonstrated strong predictive capabilities. However, ventricular transmural electrophysiological heterogeneity is known to influence repolarization dynamics and arrhythmogenic mechanisms. Explicitly incorporating endocardium, epicardium, and mid-myocardium representations may enhance physiological interpretability, but direct integration of multi-cell features can introduce severe multicollinearity and compromise model stability. To address this challenge, we propose an ordinal logistic regression (OLR) framework that integrates multi-cell qNet information through probability averaging, preserving physiological context while maintaining robust statistical behavior.

methods

resultsFor CiPA-ORd v1.0 using the ChanTest dataset, qNet achieved substantial performance, with AUCs for ROC1 and ROC2 of 1.000 and 0.958, respectively, and also meeting seven "excellent" classification criteria. In the ORd model, probability averaging consistently improved performance for both the Manual and ChanTest datasets relative to single-cell and direct multi-cell approaches.

conclusionProbability-averaged integration of multi-cell qNet predictions mitigates multicollinearity while preserving physiological relevance, yielding more stable and accurate in silico TdP risk classification and supporting broader applicability to preclinical safety assessment.

Indexed as

Heart VentriclesModels, CardiovascularTorsades de PointesAnimalsComputer SimulationEndocardiumHumansCiPAIn silico simulationsOrdinal logistic regression transmural heterogeneityProarrhythmiaqNet

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.