Evidence map›Paper›PMID 41768980›Full record

ArticleFrontiers in bioinformatics2026

Unveiling the potential of apigenin and kaempferol against colon cancer: an integrated network pharmacology and docking approach.

Anushya Selvakumar, Perpetual Ansel Chandran, Sai Shraddha, Loganathan Chandramani Priya Dharshini, Sarath Perumal, Ramanathan Karuppasamy, Abul Kalam Azad Mandal

Abstract read
In one paragraph

Article in Frontiers in bioinformatics, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Anushya Selvakumar *Department of Biotechnology, School of Bio Sciences and Technology, Vellore Institute of Technology, Vellore, Tamil Nadu, India.
Perpetual Ansel Chandran *Department of Biotechnology, School of Bio Sciences and Technology, Vellore Institute of Technology, Vellore, Tamil Nadu, India.
Sai Shraddha *Department of Biotechnology, School of Bio Sciences and Technology, Vellore Institute of Technology, Vellore, Tamil Nadu, India.
Loganathan Chandramani Priya DharshiniDepartment of Biotechnology, School of Bio Sciences and Technology, Vellore Institute of Technology, Vellore, Tamil Nadu, India.
Sarath PerumalDepartment of Biotechnology, School of Bio Sciences and Technology, Vellore Institute of Technology, Vellore, Tamil Nadu, India.
Ramanathan KaruppasamyDepartment of Biotechnology, School of Bio Sciences and Technology, Vellore Institute of Technology, Vellore, Tamil Nadu, India.
Abul Kalam Azad MandalDepartment of Biotechnology, School of Bio Sciences and Technology, Vellore Institute of Technology, Vellore, Tamil Nadu, India.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Background: Colon cancer is one of the prevalent and deadly malignancies, requiring advanced treatment strategies. Methods: IMPPAT database, drug-likeliness, bioavailability scores, and Lipinski/Ghosh rules were utilized to screen the phytochemicals. STITCH, SwissTargetPrediction, CTD, and GeneCards were utilized for target gene retrieval (Apigenin and Kaempferol). From GeneCards, OMIM, and the NCBI Ensembl database, colon cancer-related genes were collected. The PPI network was built from the overlapping genes using STRING and Cytoscape. 10 hub genes were screened using the MCC algorithm and subjected to functional enrichment and mutation frequency analysis. Genes with high mutation frequency were selected for molecular docking and MDS. Results: A total of 292 overlapping targets between the two compounds and colon cancer-related genes were identified. The PPI network resulted in ten hub genes (AKT1, IL6, JUN, NFKB1, STAT3, TNF, BCL2, IL1B, HIF1A, and TGFB1). These were significantly enriched in key oncogenic pathways. Mutation frequency analysis revealed recurrent alterations in AKT1, NFKB1, and HIF1A. Docking studies showed strong binding of Apigenin and Kaempferol with AKT1, exhibiting binding energies of -9.4 and -9.2 kcal/mol, respectively. To further assess the binding stability of the apigenin-AKT1 complex, a 100 ns MDS was performed, which confirmed the structural stability. Conclusion: Apigenin and kaempferol showed potential as dual-targeting agents for colon cancer therapy. Cell culture and animal model studies in future are warranted to substantiate the mechanistic roles in tumor suppression.

Indexed as

apigeninCamellia sinensiscolon cancerkaempferolmolecular dockingmolecular dynamics simulationnetwork pharmacology

Identifiers

PMID41768980
PMCPMC12946048

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