Evidence map›Paper›PMID 41764494›Full record

ArticleRespiratory research2026

Integrated network toxicology and multi-omics analysis reveals the role of tobacco-specific carcinogen NNK in idiopathic pulmonary fibrosis pathogenesis.

Yuwei Lai, Zhenyu Kuang, Wolong Zhou, Aiyuan Zhou, Junjie Jiang, Xiongzhou Zhang, Shujie Liu, Lunxuan Hou, Xin Li, Weifang Cui and 4 more

Abstract read
In one paragraph

Article in Respiratory research, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors.

Yuwei Lai *Department of Thoracic Surgery, Xiangya Hospital, Central South University, Changsha, Hunan, 410008, China.
Zhenyu Kuang *Department of Thoracic Surgery, Xiangya Hospital, Central South University, Changsha, Hunan, 410008, China.
Wolong ZhouDepartment of Thoracic Surgery, Xiangya Hospital, Central South University, Changsha, Hunan, 410008, China.
Aiyuan ZhouDepartment of Respiratory and Critical Care Medicine, Xiangya Hospital, Central South University, Changsha, 410008, China.
Junjie JiangDepartment of Thoracic Surgery, Xiangya Hospital, Central South University, Changsha, Hunan, 410008, China.
Xiongzhou ZhangDepartment of Thoracic Surgery, Xiangya Hospital, Central South University, Changsha, Hunan, 410008, China.
Shujie LiuDepartment of Thoracic Surgery, Xiangya Hospital, Central South University, Changsha, Hunan, 410008, China.
Lunxuan HouDepartment of Thoracic Surgery, Xiangya Hospital, Central South University, Changsha, Hunan, 410008, China.
Xin LiDepartment of Thoracic Surgery, Xiangya Hospital, Central South University, Changsha, Hunan, 410008, China.
Weifang CuiDepartment of Thoracic Surgery, Xiangya Hospital, Central South University, Changsha, Hunan, 410008, China.
Zhangjie WangDepartment of Thoracic Surgery, Xiangya Hospital, Central South University, Changsha, Hunan, 410008, China.
Minghao DuanDepartment of Public Health Laboratory Sciences, School of Public Health, Hengyang Medical School, University of South China, Hengyang, Hunan, 412017, China. 1625164018@qq.com.
Chunfang ZhangDepartment of Thoracic Surgery, Xiangya Hospital, Central South University, Changsha, Hunan, 410008, China. zhcf3801@csu.edu.cn.
Chaojun DuanDepartment of Thoracic Surgery, Xiangya Hospital, Central South University, Changsha, Hunan, 410008, China. duancjxy@csu.edu.cn.

Funding

China Postdoctoral Science Foundation 2023M733967National Natural Science Foundation of China No.82300097the National Natural Science Foundation of Hunan Province NO.2023JJ41025the Youth Science Foundation of Xiangya Hospital 2022Q06
6 · The paper itself

Abstract

4-(Methylnitrosamino)-1-(3-pyridyl)-1-butanone (NNK) is a potent tobacco-specific nitrosamine that has been widely recognized as a major carcinogen contributing to smoking-related lung diseases. Although its involvement in lung cancer has been extensively studied, the underlying pathogenic mechanisms by which NNK contributes to the development of idiopathic pulmonary fibrosis (IPF) remain unclear.In this study, potential IPF-related targets of NNK were identified through integrating multiple public databases. Gene Ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway enrichment analyses were performed to uncover key biological processes associated with NNK-induced IPF. Weighted gene co-expression network analysis (WGCNA) combined with machine learning approaches was employed to screen for core regulatory genes. Furthermore, molecular docking and 100-nanosecond molecular dynamics simulations were utilized to assess the binding interactions between NNK and candidate target proteins. Single-cell RNA sequencing (scRNA-seq) and immune infiltration analyses were also performed to validate gene expression patterns and characterize the immune microenvironment.A total of 204 overlapping targets associated with both NNK exposure and IPF were identified, which were predominantly enriched in the biological processes of oxidative stress, cell cycle regulation, and the FoxO signaling pathway. Six hub genes (BCHE, CD38, MMP7, PLA2G2A, ST6GAL1, and TIMP1) were identified as potential key diagnostic biomarkers.This study suggests that NNK may contribute to IPF progression through multiple mechanisms, including disrupting redox homeostasis, activating fibrotic signaling pathways, and modulating the immune microenvironment. The identified core genes and associated pathways provide novel insights into the molecular mechanisms underlying smoking-related IPF and offer promising targets for future therapeutic strategies.

Indexed as

CarcinogensIdiopathic Pulmonary FibrosisNitrosaminesButanonesGene Regulatory NetworksHumansMolecular Docking SimulationMultiomics4-(N-methyl-N-nitrosamino)-1-(3-pyridyl)-1-butanoneButanonesCarcinogensnitrosamine 4-(methylnitrosamino)-1-(3-pyridyl)-1-butanoneNitrosamines4-(Methylnitrosamino)-1-(3-pyridyl)-1-butanoneidiopathic pulmonary fibrosisMolecular dockingNetwork toxicology

Identifiers

PMID41764494
PMCPMC12961785

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.