Evidence map›Paper›PMID 41760684›Full record

ArticleNature communications2026

Polymorphism and evolutionary origins of accessory chromosomes in the basidiomycete Tremella fuciformis.

Jinxiang Zhang, Qianwen Tong, Fengjiao Lin, Xingcai An, Haichen Huang, Hualian Chen, Jingjing Ye, Huaizhen Xu, Xiaomeng Lv, Zhiwen Lv and 6 more

Abstract read
In one paragraph

Article in Nature communications, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Telomere-to-Telomere Genome Assembly ofJournal of fungi (Basel, Switzerland) · 2026
    Article
  2. Review
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors.

Jinxiang Zhang *College of Life Science, Fujian Agriculture and Forestry University, Fuzhou, Fujian, China.
Qianwen Tong *College of Life Science, Fujian Agriculture and Forestry University, Fuzhou, Fujian, China.
Fengjiao Lin *College of Life Science, Fujian Agriculture and Forestry University, Fuzhou, Fujian, China.
Xingcai AnCollege of Agriculture, Yunnan University, Kunming, Yunnan, China.
Haichen HuangCollege of Life Science, Fujian Agriculture and Forestry University, Fuzhou, Fujian, China.
Hualian ChenCollege of Life Science, Fujian Agriculture and Forestry University, Fuzhou, Fujian, China.
Jingjing YeCollege of Life Science, Fujian Agriculture and Forestry University, Fuzhou, Fujian, China.
Huaizhen XuCollege of Life Science, Fujian Agriculture and Forestry University, Fuzhou, Fujian, China.
Xiaomeng LvCollege of Life Science, Fujian Agriculture and Forestry University, Fuzhou, Fujian, China.
Zhiwen LvState Key Laboratory of Microbial Diversity and Innovative Utilization, Institute of Microbiology, Chinese Academy of Sciences, Beijing, China.
Fangting ZengCollege of Life Science, Fujian Agriculture and Forestry University, Fuzhou, Fujian, China.
Tuo ZhangCollege of Life Science, Fujian Agriculture and Forestry University, Fuzhou, Fujian, China.
Xiaoping WuCollege of Life Science, Fujian Agriculture and Forestry University, Fuzhou, Fujian, China.
Baogui XieCollege of Life Science, Fujian Agriculture and Forestry University, Fuzhou, Fujian, China. mrcfafu@163.com.ORCID http://orcid.org/0000-0003-2192-4168
Ray MingDepartment of Plant Biology, University of Illinois at Urbana-Champaign, 1201 W. Gregory Drive, Urbana, IL, USA. rayming@illinois.edu.ORCID http://orcid.org/0000-0002-9417-5789
Youjin DengCollege of Life Science, Fujian Agriculture and Forestry University, Fuzhou, Fujian, China. dengyoujin1980@163.com.ORCID http://orcid.org/0000-0002-4025-203X

Funding

National Natural Science Foundation of China (National Science Foundation of China) 32472810
6 · The paper itself

Abstract

Accessory chromosomes are non-essential for growth but poorly characterized in basidiomycetes, unlike in Ascomycota. Here, we report whole-genome sequencing of 16 strains of the basidiomycete Tremella fuciformis (silver ear fungus), generating 27 complete haplotypes (5 monokaryons and 11 dikaryons, each contributing two distinct haplotypes). Genome size varied by over one-third, driven by accessory chromosomes and repetitive sequences in core chromosomes (essential for basic biology). Each strain harbored 8-10 core chromosomes (polymorphic via fusion/fission) and 2-10 accessory chromosomes (total 108), whose distribution reflects phylogeny and symbiotic specificity with the ascomycete Annulohypoxylon stygium. Accessory chromosomes are small, transposon-rich, gene-poor, and exhibit higher sequence similarity but more diverse structural variations than core chromosomes, with few shared genes across phylogenetic branches. Both chromosome types show frequent copy number variation during cell type transformation. Most accessory chromosome genes lack homologs in core chromosomes or existing gene databases. Our study reveals basidiomycete accessory chromosome diversity, suggesting an origin from unexplored species pre-dating T. fuciformis speciation.

Indexed as

BasidiomycotaChromosomes, FungalEvolution, MolecularPolymorphism, GeneticGenome, FungalGenome SizeHaplotypesPhylogeny

Identifiers

PMID41760684
PMCPMC13066641

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.