Evidence map›Paper›PMID 41760616›Full record

ArticleNature communications2026

The dynamic distribution of genetic tandem amplifications in a heteroresistant Escherichia coli population revealed by ultra-deep long read sequencing.

Sofia Jonsson, Andrei Guliaev, Brandon A Berryhill, Dan I Andersson, Hervé Nicoloff

Abstract read
In one paragraph

Article in Nature communications, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Sofia JonssonDepartment of Medical Biochemistry and Microbiology, Uppsala University, Uppsala, Sweden.ORCID 0009-0000-8653-0077
Andrei GuliaevDepartment of Medical Biochemistry and Microbiology, Uppsala University, Uppsala, Sweden.ORCID 0000-0002-6329-2421
Brandon A BerryhillDepartment of Biology, Emory University, Atlanta, GA, USA.ORCID 0000-0003-3430-0901
Dan I AnderssonDepartment of Medical Biochemistry and Microbiology, Uppsala University, Uppsala, Sweden.ORCID 0000-0001-6640-2174
Hervé NicoloffDepartment of Medical Biochemistry and Microbiology, Uppsala University, Uppsala, Sweden. herve.nicoloff@imbim.uu.se.ORCID 0000-0002-4848-1371

Funding

Foundation for the National Institutes of Health (Foundation for the National Institutes of Health, Inc.) 1U19AI158080-01Knut och Alice Wallenbergs Stiftelse (Knut and Alice Wallenberg Foundation) 2018.0168Vetenskapsrådet (Swedish Research Council) 2021-02091
6 · The paper itself

Abstract

Antibiotic heteroresistance, characterized by rare resistant subpopulations of bacteria within a susceptible main population, is associated with treatment failure and often caused by tandem amplification of resistance genes. Here, we investigated how the distribution of tandem amplifications affects heteroresistance using an approach combining genetic engineering and ultra-deep Nanopore sequencing to accurately quantify the distribution of tandem amplification copy numbers on plasmids down to frequencies of 10

Indexed as

Drug Resistance, BacterialEscherichia coliGene AmplificationAnti-Bacterial AgentsEscherichia coli ProteinsHigh-Throughput Nucleotide SequencingMicrobial Sensitivity TestsNanopore SequencingPlasmidsAnti-Bacterial AgentsEscherichia coli Proteins

Identifiers

PMID41760616
PMCPMC12953903

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.