Evidence map›Paper›PMID 41758133›Full record

ArticlePacific Symposium on Biocomputing. Pacific Symposium on Biocomputing2026

Higher-order Interaction Matters: Modeling Epidemics via Dynamic Hypergraph Neural Networks.

Songyuan Liu, Shengbo Gong, Tianning Feng, Zewen Liu, Max S Y Lau, Wei Jin

Abstract read
In one paragraph

Article in Pacific Symposium on Biocomputing. Pacific Symposium on Biocomputing, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Songyuan LiuDepartment of Computer Science, Emory University, Atlanta, GA, USA.
Shengbo GongDepartment of Computer Science, Emory University, Atlanta, GA, USA.
Tianning FengDepartment of Computer Science, Emory University, Atlanta, GA, USA.
Zewen LiuDepartment of Computer Science, Emory University, Atlanta, GA, USA.
Max S Y LauDepartment of Biostatistics and Bioinformatics, Emory University, Atlanta, GA, USA.
Wei JinDepartment of Computer Science, Emory University, Atlanta, GA, USA.

Funding

Interpretable and Adaptable Graph Neural Networks: Modeling Metapopulation Dynamics of Vaccine-Preventable Childhood InfectionsR01AI189829 · NIAID · EMORY UNIVERSITY · PI Wei Jin, Siu Yin (Max) Lau · 2025 to 2026
$1.3M
SCH: Towards Foundation Epidemic Models for Respiratory Infections: A Novel Spatiotemporal Machine Learning FrameworkR01AI197111 · NIAID · EMORY UNIVERSITY · PI Wei Jin, Siu Yin (Max) Lau · 2025 to 2026
$599k
NIAID NIH HHS R01 AI189829NIAID NIH HHS R01 AI197111
6 · The paper itself

Abstract

The ongoing need for effective epidemic modeling has driven advancements in capturing the complex dynamics of infectious diseases. Traditional models, such as Susceptible-Infected- Recovered, and graph-based approaches often fail to account for higher-order interactions and the nuanced structure pattern inherent in human contact networks. Higher-order interactions, such as those in schools, workplaces, or public transit, involve simultaneous contact among more than two individuals. This study introduces a novel Human Contact-Tracing Hypergraph Neural Network framework tailored for epidemic modeling called EpiDHGNN, leveraging the capabilities of hypergraphs to model intricate, higher-order relationships from both location and individual level. Both real-world and synthetic epidemic data are used to train and evaluate the model. Results demonstrate that EpiDHGNN consistently outperforms baseline models across various epidemic modeling tasks, such as source detection and forecast, by approximately 12.1% through effectively capturing the higher-order interactions and preserving the complex structure of human interactions. This work underscores the potential of representing human contact data as hypergraphs and employing hypergraphbased methods to improve epidemic modeling, providing reliable insights for public health decision-making.

Indexed as

EpidemicsEpidemiological ModelsNeural Networks, ComputerAlgorithmsCommunicable DiseasesComputational BiologyContact TracingGraph Neural NetworksHumans

Identifiers

PMID41758133
PMCPMC12952669

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.