Evidence map›Paper›PMID 41757451›Full record

ArticlePhysiologia plantarum

Characterization of Phytoene Desaturase Knockout Carotenoid-Deficient Microalgal Mutants Generated by Cas9-Ribonucleoprotein Complexes.

Ana Molina-Márquez, Simon Kelterborn, Peter Hegemann, Miguel Pérez-Rodríguez, Javier Vigara, Rosa León

Abstract read
In one paragraph

Article in Physiologia plantarum. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Ana Molina-MárquezLaboratory of Biochemistry, Center for Natural Resources, Health and Environment (RENSMA). University of Huelva, Huelva, Spain.ORCID https://orcid.org/0000-0002-6291-3708
Simon KelterbornInstitute of ‑Translational Physiology, Charité-University of Berlin. Charité Platz 1, Berlin, Germany.ORCID https://orcid.org/0000-0002-4881-739X
Peter HegemannInstitute of Biology, Experimental Biophysics, Humboldt-University of Berlin, Berlin, Germany.ORCID https://orcid.org/0000-0003-3589-6452
Miguel Pérez-RodríguezDepartment of Cell Biology, Physiology and Immunology, University of Córdoba, Campus of International Agri-Food Excellence CeiA3, Córdoba, Spain.ORCID https://orcid.org/0000-0003-1272-9213
Javier VigaraLaboratory of Biochemistry, Center for Natural Resources, Health and Environment (RENSMA). University of Huelva, Huelva, Spain.ORCID https://orcid.org/0000-0002-2617-5410
Rosa LeónLaboratory of Biochemistry, Center for Natural Resources, Health and Environment (RENSMA). University of Huelva, Huelva, Spain.ORCID https://orcid.org/0000-0002-6243-6454

Funding

Agencia Estatal de Investigación-MCIN/AEI/10.13039/501100011033 2019-110438RB-C22Agencia Estatal de Investigación-MCIN/AEI/10.13039/501100011033 PID2022-140995OB-C21German Research Foundation (DFG) 426566805Hertie Foundation
6 · The paper itself

Abstract

Phytoene desaturase (PDS; EC 1.3.5.5) is a key enzyme of the carotenoid biosynthetic pathway, catalyzing the desaturation of phytoene, precursor of all carotenoids. In this study, several PDS-knockout (PDS-KO) transformants of the chlorophyte microalga Chlamydomonas reinhardtii were generated using a reverse genetics strategy. Two single guide RNAs (sgRNA) were designed to target the first exon of the PDS gene, and pre-assembled Cas9 ribonucleoprotein (RNPs) complexes were delivered into microalgal nuclei by electroporation. Multiple white PDS-KO transformants were successfully obtained by this approach, and three independent transformant lines were subsequently characterized. By integrating ultrastructural, pigment and transcriptomic analyses of dark-grown cells of several PDS-KO carotenoid-deficient mutants in comparison with the parental strain, it was demonstrated that carotenoids are indispensable components of multiple cellular architectures. Chromatographic analysis confirmed that the only carotenoid accumulated in these transformants was phytoene, which lacks the critical structural and photoprotective functions of its colored derivatives. Transmission Electron Microscopy (TEM) observations revealed profound ultrastructure alterations, including poorly developed chloroplasts and effects on other cellular structures that were either absent or severely disorganized. Consistently, clustering differentially expressed genes into functional groups revealed downregulation of pathways associated with photosynthesis, chlorophyll and carotenoid biosynthesis, ribosome biogenesis, and vesicle and membrane trafficking in the PDS-KO lines. Conversely, upregulation of regulatory and retrotransposon-inducing genes was observed. These findings underscore the central metabolic role of colored carotenoids in plant cells, highlighting their essential contribution to cellular homeostasis and photosynthetic competence.

Indexed as

CarotenoidsChlamydomonas reinhardtiiMicroalgaeOxidoreductasesRibonucleoproteinsCRISPR-Cas SystemsGene Knockout TechniquesMutationCarotenoidsOxidoreductasesphytoene dehydrogenaseRibonucleoproteinscarotenoidsChlamydomonas reinhardtiiCRISPRPDSphytoene desaturaseplastoquinonetranscriptomics

Identifiers

PMID41757451
PMCPMC12947057

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.