Evidence map›Paper›PMID 41754546›Full record

ArticleViruses2026

Type II Restriction of 2-Aminoadenosine (dZ)-Modified DNA and Production of dZ-Modified Plasmid in

Weiwei Yang, Michael S Kuska, Nan Dai, Laurence M Ettwiller, Ivan R Corrêa, Shuang-Yong Xu

Abstract read
In one paragraph

Article in Viruses, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Weiwei YangNew England Biolabs, Inc., 240 County Road, Ipswich, MA 01938, USA.
Michael S KuskaNew England Biolabs, Inc., 240 County Road, Ipswich, MA 01938, USA.
Nan DaiNew England Biolabs, Inc., 240 County Road, Ipswich, MA 01938, USA.
Laurence M EttwillerNew England Biolabs, Inc., 240 County Road, Ipswich, MA 01938, USA.ORCID 0000-0002-3957-6539
Ivan R CorrêaNew England Biolabs, Inc., 240 County Road, Ipswich, MA 01938, USA.ORCID 0000-0002-3169-6878
Shuang-Yong XuNew England Biolabs, Inc., 240 County Road, Ipswich, MA 01938, USA.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The modified DNA base 2,6 aminopurine (2-aminoadenine, (d)Z base) was originally found in phages to counteract host-encoded restriction systems. However, only a limited number of restriction endonucleases (REases) have been tested on dZ-modified DNA. Here, we report the activity results of 147 REases on dZ-modified PCR DNA. Among the enzymes tested, 53% are resistant or partially resistant, and 47% are sensitive when their restriction sites contain one to six modified bases. Sites with four to six dZ substitutions are most likely to resist Type II restriction. Our results support the notion that dZ-modified phage genomes evolved to combat host-encoded restriction systems. dZ-modified DNA can also reduce phage T5 exonuclease degradation, but has no effect on RecBCD digestion. When two genes for dZ biosynthesis and one gene for dATP hydrolysis from

Indexed as

2-AminopurineDNADNA Restriction EnzymesEscherichia coliPlasmidsBacteriophages2-AminopurineDNADNA Restriction Enzymes2-aminoadenosine (dZ)dZ-biosynthesishypermodified DNAType II restriction

Identifiers

PMID41754546
PMCPMC12944874

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.