Evidence map›Paper›PMID 41752918›Full record

ArticleLife (Basel, Switzerland)2026

Deciphering the Genomic Landscape of Oropharyngeal Squamous Cell Carcinoma: Distinct Mutation Patterns in Disease.

Beau Hsia, Gabriel Bitar, Pedro S Bonilla, Vinay D Veluvolu, Nathan Tran, Saif Alshaka, Eli Oved, Bhavish Aubeelauck, Hassan Nur, Abubakar Tauseef and 2 more

Abstract read
In one paragraph

Article in Life (Basel, Switzerland), 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
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1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors.

Beau HsiaSchool of Medicine, Creighton University, Phoenix, AZ 85012, USA.ORCID 0009-0009-6403-502X
Gabriel BitarSchool of Medicine, Creighton University, Phoenix, AZ 85012, USA.ORCID 0009-0004-5857-256X
Pedro S BonillaCollege of Human Medicine, Michigan State University, Grand Rapids, MI 49503, USA.ORCID 0000-0003-2984-3004
Vinay D VeluvoluCarle Illinois College of Medicine, University of Illinois Urbana-Champaign, Urbana, IL 61801, USA.ORCID 0000-0003-2773-9465
Nathan TranSchool of Medicine, Texas Tech University Health Sciences Center, Lubbock, TX 79905, USA.ORCID 0009-0008-7518-5157
Saif AlshakaSchool of Medicine, Creighton University, Phoenix, AZ 85012, USA.ORCID 0000-0002-9509-151X
Eli OvedSchool of Medicine, Creighton University, Phoenix, AZ 85012, USA.ORCID 0009-0003-0943-0218
Bhavish AubeelauckCHI Health Clinic, Kearney, NE 68847, USA.
Hassan NurSchool of Medicine, Creighton University, Omaha, NE 68178, USA.
Abubakar TauseefSchool of Medicine, Creighton University, Omaha, NE 68178, USA.
Vijay A PatelDivision of Pediatric Otolaryngology, Rady Children's Hospital, San Diego, CA 92134, USA.ORCID 0000-0002-8145-1721
Aliasgher KhakuH. Lee Moffitt Cancer Center and Research Institute, Tamp, FL 33612, USA.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

objectiveWe aimed to characterize the somatic mutational landscape of oropharyngeal squamous cell carcinoma (OPSCC) and identify potential genomic drivers of tumor progression and therapeutic resistance using the AACR GENIE database. STUDY

designRetrospective genomic analysis was employed.

settingWe used publicly available data from the American Association for Cancer Research (AACR) Project GENIE database accessed via cBioPortal.

methodsWe analyzed 412 tumor samples from 401 patients diagnosed with OPSCC. Somatic mutations, clinical variables and tumor characteristics were extracted and analyzed. Statistical comparisons of mutation frequencies across gender and tumor stage (primary vs. metastatic) were conducted. Co-occurrence and mutual exclusivity analyses were performed to identify significant genomic patterns.

resultsThe most frequently mutated genes included

conclusionsThis study identifies distinct genomic signatures in OPSCC subgroups, highlighting candidate biomarkers in pathways like PI3K/AKT signaling that warrant further investigation. Validating these markers in prospective trials is a critical next step to translate these findings into personalized therapeutic strategies for OPSCC patients.

Indexed as

AACR Project GENIEgenomic profilingoropharyngeal squamous cell carcinomaPIK3CAsomatic mutationstargeted therapyTP53

Identifiers

PMID41752918
PMCPMC12941683

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.