Evidence map›Paper›PMID 41743792›Full record

ArticleAdvanced intelligent discovery2025

Interpretability and Representability of Commutative Algebra, Algebraic Topology, and Topological Spectral Theory for Real-World Data.

Yiming Ren, Guo-Wei Wei

Abstract read
In one paragraph

Article in Advanced intelligent discovery, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors.

Yiming RenDepartment of Mathematics, Michigan State University, East Lansing, Michigan, USA.
Guo-Wei WeiDepartment of Mathematics, Michigan State University, East Lansing, Michigan, USA.ORCID 0000-0002-5781-2937

Funding

Discovery-Driven Mathematics and Artificial Intelligence for Biosciences and Drug DiscoveryR35GM148196 · NIGMS · UNIVERSITY OF GEORGIA · PI Guowei Wei · 2023 to 2026
$1.5M
NIGMS NIH HHS R35 GM148196
6 · The paper itself

Abstract

While recent years have witnessed a fast growth in mathematical artificial intelligence (AI). One of the most successful mathematical AI approaches is topological data analysis via persistent homology (PH) that provides explainable AI by extracting multiscale structural features from complex datasets. Interpretability is crucial for world models, the new frontier in AI that can understand and simulate reality. This article investigates the interpretability and representability of three foundational mathematical AI methods, PH, persistent Laplacians (PL) derived from topological spectral theory, and persistent commutative algebra (PCA) rooted in Stanley-Reisner theory. We apply these methods to a set of data, including geometric shapes, synthetic complexes, fullerene structures, and biomolecular systems to examine their geometric, topological, and algebraic properties. PH captures topological invariants such as connected components, loops, and voids through persistence barcodes. PL extends PH by incorporating spectral information, quantifying topological invariants, geometric stiffness, and connectivity via harmonic and nonharmonic spectra. PCA introduces algebraic invariants such as graded Betti numbers, facet persistence, and

Indexed as

explainable artificial intelligencemathematical invariantspersistent commutative algebrapersistent homologypersistent Laplacianstopological data analysis

Identifiers

PMID41743792
PMCPMC12931842

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.