Evidence map›Paper›PMID 41738748›Full record

ArticleMicrobiology spectrum2026

Puf4 is methylated and exhibits a temperature-dependent interactome in

Murat C Kalem, Sean Duffy, Amanda L M Bloom, Shichen Shen, Jan Naseer Kaur, Jun Qu, John C Panepinto

Abstract read
In one paragraph

Article in Microbiology spectrum, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Murat C Kalem *Department of Microbiology and Immunology, Witebsky Center for Microbial Pathogenesis and Immunology, Jacobs School of Medicine and Biomedical Sciences, University at Buffalo, Buffalo, New York, USA.
Sean Duffy *Department of Microbiology and Immunology, Witebsky Center for Microbial Pathogenesis and Immunology, Jacobs School of Medicine and Biomedical Sciences, University at Buffalo, Buffalo, New York, USA.ORCID 0000-0001-7445-883X
Amanda L M BloomDepartment of Microbiology and Immunology, Witebsky Center for Microbial Pathogenesis and Immunology, Jacobs School of Medicine and Biomedical Sciences, University at Buffalo, Buffalo, New York, USA.
Shichen ShenDepartment of Pharmaceutical Sciences, University at Buffalo, Buffalo, New York, USA.
Jan Naseer KaurDepartment of Microbiology and Immunology, Witebsky Center for Microbial Pathogenesis and Immunology, Jacobs School of Medicine and Biomedical Sciences, University at Buffalo, Buffalo, New York, USA.ORCID 0000-0002-4808-3904
Jun QuDepartment of Pharmaceutical Sciences, University at Buffalo, Buffalo, New York, USA.
John C PanepintoDepartment of Microbiology and Immunology, Witebsky Center for Microbial Pathogenesis and Immunology, Jacobs School of Medicine and Biomedical Sciences, University at Buffalo, Buffalo, New York, USA.ORCID 0000-0002-1162-0403

Funding

American Heart Association 827110National Institute of Allergy and Infectious Diseases R21AI33133, R0AI157459
6 · The paper itself

Abstract

The evolutionarily conserved Pumilio domain-containing RNA binding proteins (RBPs) are involved in many steps of post-transcriptional gene regulation, including RNA stability, polyadenylation, deadenylation, and translation. Most RBPs are post-translationally modified by methylation of arginine/glycine-rich domains (RG-box) though the consequences of these modifications are not well known. We determined the arginine methylation and phosphorylation landscape of the Pumilio domain containing RBP Puf4 from the basidiomycete fungus IMPORTANCE: Post-transcriptional processes play a crucial role in modulating responses to various stressors, including temperature and antifungals. To ensure adaptation and survival, stressors must be accurately sensed, and responses tightly regulated. Post-translational modifications serve as a crucial regulatory layer that orchestrates nuanced stress responses. We highlight extensive methylation and phosphorylation of the RNA-binding protein Puf4 and explore the regulatory roles of select methylated arginines. We also found that the interactome network of Puf4 varies with temperature. Cryptococcus neoformans, a basidiomycete fungus that is also an important human pathogen, is an ideal system to illustrate the evolution of gene regulatory processes and how these kingdom or clade-specific regulatory modules contribute to the pathogenic potential of fungi.

Indexed as

Cryptococcus neoformansFungal ProteinsRNA-Binding ProteinsArginineGene Expression Regulation, FungalMethylationPhosphorylationProtein Processing, Post-TranslationalTemperatureArginineFungal ProteinsRNA-Binding Proteinsarginine methylationcomplementationCryptococcus neoformansfungal pathogenmass spectrometryphosphorylationpost-translational modificationRNA immunoprecipitationtranscriptome

Identifiers

PMID41738748
PMCPMC13055242

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.