ArticleScientific data2026
Chromosome-level genome assembly of the alpine extremophyte Tibetan snow lotus, Saussurea hypsipeta Diels.
Article in Scientific data, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.
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Abstract
Saussurea hypsipeta Diels, a perennial medicinal plant used in traditional Chinese medicine, is primarily distributed on the Qinghai-Tibet Plateau, where it serves as a key component of the alpine ecosystem. The lack of genetic information and high-quality genome assembly hinders in-depth research on this species as well as its conservation and further utilization. Here, we report the chromosome-level genome assembly of this diploid species, which was accomplished by integrating Illumina short-read, PacBio HiFi long-read, and Hi-C sequencing. The final assembly size was 3.18 Gb with excellent contiguity (contig N50 = 4.33 Mb; scaffold N50 = 182.60 Mb) and integrity (BUSCO score 97.46%). Among them, 98.91% of the sequences were anchored to 16 pairs of chromosomes, and the content of repetitive sequences was 87.15%. Furthermore, we predicted 70,374 genes, including 41,655 protein-coding genes, of which 94.13% were functionally annotated. This high-quality genomic resource provides a critical foundation for elucidating the molecular mechanisms of high-altitude adaptation, also offering genetic insights into its medicinal value.
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