Evidence map›Paper›PMID 41733735›Full record

ArticleWorld journal of microbiology & biotechnology2026

Genomic and functional insights into the thermophilic strain Geobacillus sp. Geo 8.1: a source of thermostable xylanase for sustainable bioprocesses.

Songül Yaşar Yıldız, Ilaria Finore, Bora Ceylan, Doğa Umaç, Ceyda Kasavi, Gennaro Finore, Antonio Federico, Francesco Nizzolino, Luigi Leone, Annarita Poli and 1 more

Abstract read
In one paragraph

Article in World journal of microbiology & biotechnology, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Review
  2. Endo-β-1,4-Xylanase GH10 fromInternational journal of molecular sciences · 2026
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Songül Yaşar Yıldız *Department of Bioengineering, Faculty of Engineering and Natural Sciences, Istanbul Medeniyet University, Istanbul, 34700, Turkey. songul.yildiz@medeniyet.edu.tr.ORCID http://orcid.org/0000-0001-8875-3637
Ilaria Finore *Institute of Biomolecular Chemistry, National Council of Research (C.N.R.), Via Campi Flegrei 34, Pozzuoli, Naples, 80078, Italy. ilaria.finore@icb.cnr.it.ORCID http://orcid.org/0000-0003-2970-387X
Bora CeylanDepartment of Bioengineering, Faculty of Engineering, Marmara University, Istanbul, 34854, Turkey.
Doğa UmaçDepartment of Bioengineering, Faculty of Engineering, Marmara University, Istanbul, 34854, Turkey.
Ceyda KasaviDepartment of Bioengineering, Faculty of Engineering, Marmara University, Istanbul, 34854, Turkey.
Gennaro FinoreGeo Campania S.R.L, Via Passanti 61, Scafati, 84018, SA, Italy.
Antonio FedericoGeo Campania S.R.L, Via Passanti 61, Scafati, 84018, SA, Italy.
Francesco NizzolinoInstitute of Biomolecular Chemistry, National Council of Research (C.N.R.), Via Campi Flegrei 34, Pozzuoli, Naples, 80078, Italy.
Luigi LeoneInstitute of Biomolecular Chemistry, National Council of Research (C.N.R.), Via Campi Flegrei 34, Pozzuoli, Naples, 80078, Italy.
Annarita PoliInstitute of Biomolecular Chemistry, National Council of Research (C.N.R.), Via Campi Flegrei 34, Pozzuoli, Naples, 80078, Italy.
Ebru Toksoy ÖnerDepartment of Bioengineering, Faculty of Engineering, Marmara University, Istanbul, 34854, Turkey.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

A thermophilic bacterium, designated Geobacillus sp. Geo 8.1, was isolated from a submarine hydrothermal spring of Ischia Island (Italy) and characterized through genomic and biochemical analyses to evaluate its biotechnological potential. The draft genome (3.41 Mbp; GC 52.5%) revealed 3,751 coding sequences, including complete pathways for carbohydrate, lipid, and protein metabolism, and enzymes involved in stress response and hydrocarbon degradation. Phylogenomic and digital DNA–DNA hybridization analyses placed Geo 8.1 within the Geobacillus thermoleovorans/Geobacillus kaustophilus cluster. Functional annotation highlighted diverse genes encoding thermostable hydrolases such as xylanases, β-xylosidases, lipases, proteases, and α-amylases, together with catalases and dehalogenases relevant to environmental and industrial applications. Crude enzyme extracts exhibited strong xylanase activity (184 U/mL at 65 °C), and thin-layer chromatography confirmed the production of xylose as the major hydrolysis product, indicating the coordinated action of endo-xylanase and β-xylosidase. Genome reconstruction further demonstrated a complete D-xylose utilization pathway linking hemicellulose degradation to central carbon metabolism. The combined genomic and enzyme data reveal Geobacillus sp. Geo 8.1 represents a promising thermophilic biocatalyst for producing thermostable enzymes applicable to lignocellulose valorization, bioremediation, and various industrial processes.

Indexed as

Endo-1,4-beta XylanasesGenome, BacterialGeobacillusHydrothermal VentsPhylogenyBacterial ProteinsEnzyme StabilityHot TemperatureItalyMediterranean SeaBacterial ProteinsEndo-1,4-beta XylanasesBiotechnological potentialGenome analysisGeobacillusSubmarine hydrothermal spring (Ischia island)ThermophilesThermostable enzymesXylanaseXylan degradation

Identifiers

PMID41733735
PMCPMC12932336

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.