Evidence map›Paper›PMID 41733372›Full record

ArticleMicrobiology resource announcements2026

CtGAP 2.0: enhanced genome assembly, strain resolution, and phylogenomics for

Olusola Olagoke, Timothy D Read, Deborah Dean

Abstract read
In one paragraph

Article in Microbiology resource announcements, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Olusola OlagokeDepartment of Pediatrics, Division of Infectious Diseases and Global Health, University of California San Francisco School of Medicine, San Francisco, California, USA.ORCID 0000-0002-4093-2086
Timothy D ReadDepartment of Medicine, Division of Infectious Diseases, Emory University School of Medicine, Atlanta, Georgia, USA.ORCID 0000-0001-8966-9680
Deborah DeanDepartment of Pediatrics, Division of Infectious Diseases and Global Health, University of California San Francisco School of Medicine, San Francisco, California, USA.ORCID 0000-0002-4490-1746

Funding

Natural History of C. trachomatis urogenital and rectal infectionsR01AI151075 · NIAID · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI DEAN, DEBORAH ANNE, READ, TIMOTHY D. · 2020 to 2024
$4.0M
Impact of ocular microbiome, immune response and Chlamydiae on trachoma following MDAR01AI158527 · NIAID · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI DEBORAH Anne DEAN, Timothy D. Read · 2022 to 2026
$4.0M
National Institute of Allergy and Infectious Diseases R01AI151075National Institute of Allergy and Infectious Diseases R01AI158527NIAID NIH HHS R01 AI151075NIAID NIH HHS R01 AI158527
6 · The paper itself

Abstract

We present

Indexed as

Chlamydia trachomatischromosome typinggenome analysisgenome assembly pipelinephylogenomicsplasmid typing

Identifiers

PMID41733372
PMCPMC12981087

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.