Evidence map›Paper›PMID 41727721›Full record

ArticleChemical science2026

Simplest mechanism builder algorithm (simba): an automated microkinetic model discovery tool.

M Á de Carvalho Servia, K K M Hii, K Hellgardt, D Zhang, E A Del Rio Chanona

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Article in Chemical science, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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0citing papers in PubMed
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1 · What the graph read from it

What it found

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

M Á de Carvalho ServiaDepartment of Chemical Engineering, Imperial College London South Kensington London SW7 2AZ UK m.de-carvalho-servia21@imperial.ac.uk k.hellgardt@imperial.ac.uk a.del-rio-chanona@imperial.ac.uk.ORCID https://orcid.org/0000-0001-5273-7491
K K M HiiDepartment of Chemistry, Imperial College London White City London W12 0BZ UK mimi.hii@imperial.ac.uk.ORCID https://orcid.org/0000-0002-1163-0505
K HellgardtDepartment of Chemical Engineering, Imperial College London South Kensington London SW7 2AZ UK m.de-carvalho-servia21@imperial.ac.uk k.hellgardt@imperial.ac.uk a.del-rio-chanona@imperial.ac.uk.
D ZhangDepartment of Chemical Engineering, The University of Manchester Manchester M13 9PL UK dongda.zhang@manchester.ac.uk.
E A Del Rio ChanonaDepartment of Chemical Engineering, Imperial College London South Kensington London SW7 2AZ UK m.de-carvalho-servia21@imperial.ac.uk k.hellgardt@imperial.ac.uk a.del-rio-chanona@imperial.ac.uk.ORCID https://orcid.org/0000-0003-0274-2852

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Microkinetic models are key for evaluating industrial processes' efficiency and chemicals' environmental impact. Manual construction of these models is difficult and time-consuming, prompting a shift to automated methods. This study introduces SiMBA (Simplest Mechanism Builder Algorithm), a novel approach for generating microkinetic models from kinetic data. SiMBA operates through four phases: mechanism generation, mechanism translation, parameter estimation, and model comparison. Our approach systematically proposes reaction mechanisms, using matrix representations and a parallelized backtracking algorithm to manage complexity. These mechanisms are then translated into microkinetic models represented by ordinary differential equations, and optimi/zed to fit available data. Models are compared using information criteria to balance accuracy and complexity, iterating until convergence to an optimal model is reached. Case studies on an aldol condensation reaction, and the dehydration of fructose demonstrate SiMBA's effectiveness in distilling complex kinetic behaviors into simple yet accurate models. While SiMBA predicts intermediates correctly for all case studies, it does not chemically identify intermediates, requiring expert input for complex systems. Despite this, SiMBA significantly enhances mechanistic exploration, offering a robust initial mechanism that accelerates the development and modeling of chemical processes. By automating microkinetic model generation from a data-first approach, SiMBA opens new avenues for future research in automated mechanism discovery.

Identifiers

PMID41727721
PMCPMC12919723

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.