Evidence map›Paper›PMID 41725831›Full record

ArticleMatter2025

Modular salt-induced nanostructures formed by a functionalized dipeptide system.

Simona Bianco, Ravi R Sonani, Dipankar Ghosh, Tejaswini Maurya, Thomas Bizien, Alice Pincham, Andrew J Smith, Katsuaki Inoue, Annela Seddon, Massimo Vassalli and 2 more

Abstract read
In one paragraph

Article in Matter, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

  1. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors.

Simona BiancoSchool of Chemistry, University of Glasgow, Glasgow, G12 8QQ, U.K.
Ravi R SonaniDepartment of Biochemistry and Molecular Genetics, University of Virginia, Charlottesville, VA 22903, U.S.A.
Dipankar GhoshSchool of Chemistry, University of Glasgow, Glasgow, G12 8QQ, U.K.
Tejaswini MauryaSchool of Chemistry, University of Glasgow, Glasgow, G12 8QQ, U.K.
Thomas BizienSynchrotron SOLEIL, l'Orme des Merisiers, Saint-Aubin - BP 48, 91192 Gif-sur-Yvette CEDEX, France.
Alice PinchamSchool of Physics, HH Wills Physics Laboratory, University of Bristol, Bristol BS8 1TL, U.K.
Andrew J SmithDiamond Light Source Ltd, Diamond House, Harwell Science and Innovation Campus, Didcot, U.K.
Katsuaki InoueDiamond Light Source Ltd, Diamond House, Harwell Science and Innovation Campus, Didcot, U.K.
Annela SeddonSchool of Physics, HH Wills Physics Laboratory, University of Bristol, Bristol BS8 1TL, U.K.
Massimo VassalliCentre for the Cellular Microenvironment, University of Glasgow, Glasgow G12 8LT, U.K.
Edward H EgelmanDepartment of Biochemistry and Molecular Genetics, University of Virginia, Charlottesville, VA 22903, U.S.A.
Dave J AdamsSchool of Chemistry, University of Glasgow, Glasgow, G12 8QQ, U.K.

Funding

Cryo-EM of Helical Protein and Nucleoprotein Polymers at Near Atomic ResolutionR35GM122510 · NIGMS · UNIVERSITY OF VIRGINIA · PI EDWARD H. EGELMAN · 2017 to 2026
$7.3M
UVA molecular electron microscopy core for the Mid-Atlantic regionU24GM116790 · NIGMS · UNIVERSITY OF VIRGINIA · PI GALKIN, VITOLD, SAMSO, MONTSERRAT · 2017 to 2021
$2.9M
Molecular Electron Microscopy Core Facility ImprovementsG20RR031199 · NCRR · UNIVERSITY OF VIRGINIA · PI SHUPNIK, MARGARET A · 2010 to 2010
$2.0M
300 keV Liquid Helium Robotic MicroscopeS10RR025067 · NCRR · UNIVERSITY OF VIRGINIA · PI EGELMAN, EDWARD H. · 2009 to 2009
$2.0M
NCRR NIH HHS G20 RR031199NCRR NIH HHS S10 RR025067NIGMS NIH HHS R35 GM122510NIGMS NIH HHS U24 GM116790
6 · The paper itself

Abstract

Self-assembling peptides have great potential in nanotechnology. We introduce the naphthalene-modified dipeptide isoleucine-phenylalanine (2NapIF) as a modular system for creating various nanostructures via self-assembly, including fibers, nanotubes, and bundles, resulting from the addition of salts. Mechanical stirring is crucial for developing certain supramolecular architectures. Using cryo-electron microscopy (cryo-EM), we found that the structural organization of these nanostructures is primarily driven by hydrophobic stacking of aromatic rings and hydrogen bonding among peptide atoms. The diversity in packing arises from the ability of 2NapIF to adopt multiple conformations, with our studies revealing 18 distinct conformations within a KCl-induced nanotube. This results in a large asymmetric unit containing 18 molecules, with 18 conformations, that could never have been predicted with current tools. This modular system has potential applications in creating innovative materials, including robust, salt-responsive "noodles" that exceed a meter in length.

Indexed as

BiomaterialCryo-EMNanotechnology

Identifiers

PMID41725831
PMCPMC12922689

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.