Evidence map›Paper›PMID 41725811›Full record

ArticleFrontiers in microbiology2026

Genome-wide analysis of extended-spectrum beta-lactamase-producing

Naeem Ahammed Ibrahim Fahim, Afsan Sarwer, Zannatul Firdous, Md Liton Rana, Md Saiful Islam, Saifur Rahman, Amrita Pondit, Jayedul Hassan, Timothy R Walsh, Refath Farzana and 1 more

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Article in Frontiers in microbiology, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Naeem Ahammed Ibrahim FahimDepartment of Microbiology and Hygiene, Faculty of Veterinary Science, Bangladesh Agricultural University, Mymensingh, Bangladesh.
Afsan SarwerDepartment of Microbiology and Hygiene, Faculty of Veterinary Science, Bangladesh Agricultural University, Mymensingh, Bangladesh.
Zannatul FirdousDepartment of Microbiology and Hygiene, Faculty of Veterinary Science, Bangladesh Agricultural University, Mymensingh, Bangladesh.
Md Liton RanaDepartment of Microbiology and Hygiene, Faculty of Veterinary Science, Bangladesh Agricultural University, Mymensingh, Bangladesh.
Md Saiful IslamDepartment of Microbiology and Hygiene, Faculty of Veterinary Science, Bangladesh Agricultural University, Mymensingh, Bangladesh.
Saifur RahmanDepartment of Microbiology and Hygiene, Faculty of Veterinary Science, Bangladesh Agricultural University, Mymensingh, Bangladesh.
Amrita PonditDepartment of Microbiology and Hygiene, Faculty of Veterinary Science, Bangladesh Agricultural University, Mymensingh, Bangladesh.
Jayedul HassanDepartment of Microbiology and Hygiene, Faculty of Veterinary Science, Bangladesh Agricultural University, Mymensingh, Bangladesh.
Timothy R WalshDepartment of Biology, Ineos Oxford Institute for Antimicrobial Resistance, University of Oxford, Oxford, United Kingdom.
Refath FarzanaDepartment of Biology, Ineos Oxford Institute for Antimicrobial Resistance, University of Oxford, Oxford, United Kingdom.
Md Tanvir RahmanDepartment of Microbiology and Hygiene, Faculty of Veterinary Science, Bangladesh Agricultural University, Mymensingh, Bangladesh.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Objectives: This study aimed to identify multilocus sequence type (MLST), serotype, average nucleotide identity (ANI), antimicrobial resistance genes (ARGs), virulence genes (VGs), and mobile genetic elements (MGEs) from whole-genome sequences of 10 Methods: Ten Results: Bioinformatics analysis revealed that most isolates displayed unique sequence types (STs) and core genome sequence types (cgSTs), while three isolates shared both ST1431 and cgST104784, indicating close genetic relatedness supported by ANI analysis. In shrimp and tuna isolates, both O and H antigens were detected, whereas crab isolates carried either O or H antigens. Pangenome analysis identified 56.4% strain-specific genes, 34.2% dispensable genes, and 9.4% core genes, with functions categorized into clusters of orthologous groups (COGs). Several ARGs, including beta-lactamase genes ( Conclusion: These findings underscore the potential role of seafood in disseminating beta-lactamase-producing

Indexed as

antimicrobial resistancebeta-lactamaseEscherichia coliglobal-phylogenyone healthseafoodvirulencewhole-genome-sequencing

Identifiers

PMID41725811
PMCPMC12920492

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.