Evidence map›Paper›PMID 41725686›Full record

ArticleJournal of open source software2025

sleev: An R Package for Semiparametric Likelihood Estimation with Errors in Variables.

Jiangmei Xiong, Sarah C Lotspeich, Joey B Sherrill, Gustavo Amorim, Bryan E Shepherd, Ran Tao

Abstract read
In one paragraph

Article in Journal of open source software, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Jiangmei XiongDepartment of Biostatistics, Vanderbilt University Medical Center, USA.ORCID 0000-0002-7481-765X
Sarah C LotspeichDepartment of Statistical Sciences, Wake Forest University, USA.ORCID 0000-0001-5380-2427
Joey B SherrillBrigham Young University, USA.ORCID 0009-0002-2741-0475
Gustavo AmorimDepartment of Biostatistics, Vanderbilt University Medical Center, USA.ORCID 0000-0002-2941-5360
Bryan E ShepherdDepartment of Biostatistics, Vanderbilt University Medical Center, USA.ORCID 0000-0002-3758-5992
Ran TaoDepartment of Biostatistics, Vanderbilt University Medical Center, USA.ORCID 0000-0002-1106-2923

Funding

Tennessee CFAR: Implementation of Culturally Responsive Trauma-Informed Care with Youth with HIV in Memphis, TNP30AI110527 · NIAID · VANDERBILT UNIVERSITY MEDICAL CENTER · PI Stephany Norah Duda · 2015 to 2026
$27.5M
Outcome Dependent Sampling Studies of Longitudinal Data: Design and AnalysisR01HL094786 · NHLBI · VANDERBILT UNIVERSITY MEDICAL CENTER · PI Jonathan Scott Schildcrout · 2009 to 2026
$6.1M
Statistical methods and designs for correlated outcome and covariate errors in studies of HIV/AIDSR37AI131771 · NIAID · VANDERBILT UNIVERSITY MEDICAL CENTER · PI Pamela A Shaw, Bryan Earl Shepherd · 2023 to 2026
$3.4M
Statistical methods for correlated outcome and covariate errors in studies of HIV/AIDSR01AI131771 · NIAID · VANDERBILT UNIVERSITY MEDICAL CENTER · PI SHAW, PAMELA A, SHEPHERD, BRYAN EARL · 2018 to 2022
$3.0M
NHLBI NIH HHS R01 HL094786NIAID NIH HHS P30 AI110527NIAID NIH HHS R01 AI131771NIAID NIH HHS R37 AI131771
6 · The paper itself

Abstract

Data with measurement error in the outcome, covariates, or both are not uncommon, particularly with the increased use of routinely collected data for biomedical research. With error-prone data, often only a subsample of study data is validated; such settings are known as two-phase studies. The sieve maximum likelihood estimator (SMLE), which combines the error-prone data on all records with the validated data on a subsample, is a highly efficient and robust method to analyze such data. However, given their complexity, a computationally efficient and user-friendly tool is needed to obtain the SMLEs. The R package sleev fills this gap by making semiparametric likelihood-based inference using the SMLEs for error-prone two-phase data in settings with binary and continuous outcomes. Functions from this package can be used to analyze data with error-prone binary or continuous responses and error-prone covariates.

Identifiers

PMID41725686
PMCPMC12922639

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.