Evidence map›Paper›PMID 41724979›Full record

ArticleBMC plant biology2026

The identification of gibberellin 2-oxidase gene family in cotton and functional analysis.

Yating Wei, Ao Feng, Mingzhe Tuo, Shenglong Song, Yong Zhang, Shuaishuai Cheng, Xinyu Zhang, Yanjun Li, Jie Sun

Abstract read
In one paragraph

Article in BMC plant biology, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. The Gibberellin 2-Oxidase GeneInternational journal of molecular sciences · 2026
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Yating Wei *The Key Oasis Eco-Agriculture Laboratory of Xinjiang Production and Construction Group, College of Agriculture, Shihezi University, Shihezi, 832000, Xinjiang, China.
Ao Feng *The Key Oasis Eco-Agriculture Laboratory of Xinjiang Production and Construction Group, College of Agriculture, Shihezi University, Shihezi, 832000, Xinjiang, China.
Mingzhe TuoThe Key Oasis Eco-Agriculture Laboratory of Xinjiang Production and Construction Group, College of Agriculture, Shihezi University, Shihezi, 832000, Xinjiang, China.
Shenglong SongThe Key Oasis Eco-Agriculture Laboratory of Xinjiang Production and Construction Group, College of Agriculture, Shihezi University, Shihezi, 832000, Xinjiang, China.
Yong ZhangThe Key Oasis Eco-Agriculture Laboratory of Xinjiang Production and Construction Group, College of Agriculture, Shihezi University, Shihezi, 832000, Xinjiang, China.
Shuaishuai ChengThe Key Oasis Eco-Agriculture Laboratory of Xinjiang Production and Construction Group, College of Agriculture, Shihezi University, Shihezi, 832000, Xinjiang, China.
Xinyu ZhangThe Key Oasis Eco-Agriculture Laboratory of Xinjiang Production and Construction Group, College of Agriculture, Shihezi University, Shihezi, 832000, Xinjiang, China. 1554991731@qq.com.
Yanjun LiThe Key Oasis Eco-Agriculture Laboratory of Xinjiang Production and Construction Group, College of Agriculture, Shihezi University, Shihezi, 832000, Xinjiang, China. liyanjun@shzu.edu.cn.
Jie SunThe Key Oasis Eco-Agriculture Laboratory of Xinjiang Production and Construction Group, College of Agriculture, Shihezi University, Shihezi, 832000, Xinjiang, China.

Funding

Bingtuan Science and Technology Program Project 2023CB008-26Key technology research and development projects of BINGTUAN 2024AB001Major Science and Technology Special Project of Xinjiang Uygur Autonomous Region 2024A02002-5Science and Technology Plan Project of Shihezi 2024ZD03the National Natural Science Foundation of China 31860395
6 · The paper itself

Abstract

backgroundGibberellin (GA) homeostasis is critical for plant growth and development, with gibberellin 2-oxidases (GA2oxs) functioning as key regulators by deactivating bioactive GAs. Mepiquat chloride (MC), a widely used plant growth regulator in cotton production, effectively suppresses vegetative growth to improve yield and fiber quality, yet its molecular mechanisms, particularly concerning GA catabolism, remain incompletely understood.

methodsIn this study, a genome-wide identification of GA2ox genes was performed in upland cotton (Gossypium hirsutum), followed by systematic analysis of their gene structures, conserved protein motifs, chromosomal locations, and expression patterns. Virus-induced gene silencing (VIGS) technology was used for perform functional validation of two candidate genes, GhGA2ox6 and GhGA2ox31. RNA-sequencing was used to explore the differentially expressed genes and enriched pathways in GhGA2ox6-silenced plants. Weighted gene co-expression network analysis (WGCNA) was further employed to explore the key gene modules and Hub genes associated with hormone pathways.

resultsA total of 39 GhGA2ox genes were identified and classified into three subfamilies: C20-GA2ox-I, C19-GA2ox-I, and C19-GA2ox-II. Expression profiling analysis revealed that tissue-specific patterns of GhGA2ox genes, and GhGA2ox6 and GhGA2ox31 were significantly up-regulated in response to MC treatment. VIGS-mediated silencing of GhGA2ox6 resulted in a marked increase in cotton plant height, while silencing GhGA2ox31 had no obvious phenotypic change. Further transcriptomic profiling analysis found that the height-promoting phenotype of GhGA2ox6-silenced plants was driven by a coordinated multi-hormone regulatory network involving gibberllins, auxins, and cytokinins. WGCNA identified 3 gene modules were significantly associated with hormone contents, and 36 Hub genes involved in ethylene, auxin, jasmonate, and gibberenllin pathways.

conclusionsCollectively, our findings indicate that GhGA2ox6 acts as a negative regulator of cotton plant height and is involved in MC-mediated growth regulation. The WGCNA further complemented the multi-hormone coordinated regulatory mechanism underlying GhGA2ox6 function. This study provides novel insights into the molecular mechanisms underlying MC-regulated cotton growth and offers a potential target gene for modulating cotton plant growth via genetic engineering techniques.

Indexed as

GossypiumMixed Function OxygenasesPlant ProteinsGene Expression Regulation, PlantGene SilencingGenes, PlantGibberellinsMultigene FamilyPlant Growth Regulatorsgibberellin 2-dioxygenaseGibberellinsMixed Function OxygenasesPlant Growth RegulatorsPlant ProteinsGA2oxG. hirsutumPlant heightRNA-seqVIGS

Identifiers

PMID41724979
PMCPMC13032576

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LicenceCC BY-NC-ND
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.