Evidence map›Paper›PMID 41723811›Full record

ArticleSTAR protocols2026

Protocol for chromatin immunoprecipitation using isolated antheridia of Marchantia polymorpha.

Keisuke Inoue, Kanta Kotani, Shohei Yamaoka, Takashi Araki

Abstract read
In one paragraph

Article in STAR protocols, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Keisuke InoueGraduate School of Biostudies, Kyoto University, Kyoto 606-8501, Japan; Center for Living Systems Information Science (CeLiSIS), Kyoto University, Kyoto 606-8501, Japan. Electronic address: inoue.keisuke.6w@kyoto-u.ac.jp.
Kanta KotaniGraduate School of Biostudies, Kyoto University, Kyoto 606-8501, Japan.
Shohei YamaokaGraduate School of Biostudies, Kyoto University, Kyoto 606-8501, Japan.
Takashi ArakiGraduate School of Biostudies, Kyoto University, Kyoto 606-8501, Japan. Electronic address: araki.takashi.5a@kyoto-u.ac.jp.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Chromatin immunoprecipitation (ChIP) is a fundamental technique used to investigate the binding sites of transcription factors (TFs) and histone modifications throughout the genome. Here, we present the ChIP protocol using the model bryophyte Marchantia polymorpha. We describe steps for collecting antheridia, the ChIP procedure, and validating binding sites of TFs by ChIP-qPCR. This protocol, with modifications, can be applied to ChIP and its associated techniques for other TFs or DNA-binding proteins in other tissues of M. polymorpha.

Indexed as

Chromatin ImmunoprecipitationMarchantiaBinding SitesPlant ProteinsTranscription FactorsPlant ProteinsTranscription FactorsChIPchromatin immunoprecipitationgene expressionplant sciences

Identifiers

PMID41723811
PMCPMC12938844

What OpenQuestion holds

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LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.