Evidence map›Paper›PMID 41723135›Full record

ArticleScientific data2026

De novo transcriptome assembly of the Moroccan fir, Abies marocana Trab.

Belén Méndez-Cea, Isabel García-García, Manuel Pavesio-Toledano, Jose Luis Horreo, José Ignacio Seco, Francisco Javier Gallego, Juan Carlos Linares

Abstract readDataset
In one paragraph

Article in Scientific data, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Belén Méndez-Cea *Dpto de Sistemas Físicos, Químicos y Naturales, Universidad Pablo de Olavide, 41013, Sevilla, Spain.
Isabel García-García *Dpto de Genética, Fisiología y Microbiología, UD Genética, Facultad de CC Biológicas, Universidad Complutense de Madrid, 28040, Madrid, Spain. isabel06@ucm.es.ORCID 0000-0003-1165-8900
Manuel Pavesio-ToledanoDpto de Genética, Fisiología y Microbiología, UD Genética, Facultad de CC Biológicas, Universidad Complutense de Madrid, 28040, Madrid, Spain.
Jose Luis HorreoDpto de Genética, Fisiología y Microbiología, UD Genética, Facultad de CC Biológicas, Universidad Complutense de Madrid, 28040, Madrid, Spain.
José Ignacio SecoDpto de Sistemas Físicos, Químicos y Naturales, Universidad Pablo de Olavide, 41013, Sevilla, Spain.
Francisco Javier GallegoDpto de Genética, Fisiología y Microbiología, UD Genética, Facultad de CC Biológicas, Universidad Complutense de Madrid, 28040, Madrid, Spain.ORCID 0000-0002-9921-8960
Juan Carlos LinaresDpto de Sistemas Físicos, Químicos y Naturales, Universidad Pablo de Olavide, 41013, Sevilla, Spain.ORCID 0000-0001-8375-6353

Funding

Junta de Andalucía PAIDI, P18-RT-1170
6 · The paper itself

Abstract

The Moroccan fir (Abies marocana Trab.) is an endangered conifer endemic to the western Rif Mountains. Despite its ecological and economic significance, no transcriptomic data was previously available for the species. Here, we present the first de novo transcriptome assembly for A. marocana, generated from RNA-seq data obtained from three organs (leaf, stem, and root) subjected to different environmental conditions (drought, heat, cold, hormones, and physical damage), using both short- and long-read sequencing technologies, to achieve a comprehensive representation of the species' transcriptome. The assembly achieved a completeness value of 92.1% according to BUSCO, with 279,439 final transcripts, of which approximately 45.2% were functionally annotated. This high-quality transcriptome provides a valuable resource for advancing genetic research and supporting conservation efforts for this vulnerable species.

Indexed as

AbiesTranscriptomeMoroccoSequence Analysis, RNA

Identifiers

PMID41723135
PMCPMC13036036

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.