Evidence map›Paper›PMID 41722777›Full record

ArticleMolecular & cellular proteomics : MCP2026

Spatial Profiling of Glycosaminoglycans (GAGomics) From Laser Microdissected Mouse Brain.

Elias Mernie, Joseph Zaia

Abstract read
In one paragraph

Article in Molecular & cellular proteomics : MCP, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors.

Elias MernieDepartment of Biochemistry & Cell Biology, Center for Biomedical Mass Spectrometry, Chobanian & Avedisian School of Medicine, Boston University, Boston, Massachusetts, USA.
Joseph ZaiaDepartment of Biochemistry & Cell Biology, Center for Biomedical Mass Spectrometry, Chobanian & Avedisian School of Medicine, Boston University, Boston, Massachusetts, USA. Electronic address: jzaia@bu.edu.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Glycosaminoglycans (GAGs) are linear, negatively charged polysaccharides composed of repeating disaccharide units. Heparan sulfate (HS) and chondroitin sulfate (CS) are highly sulfated GAG classes, ubiquitously expressed in mammalian tissues, that play critical roles in cellular signaling, tissue homeostasis, and disease progression. Aside from their biological importance, the structural analysis of HS and CS remains limited to bulk tissue analysis due to their extensive heterogeneity, structural complexity, and the presence of isomers and epimers. In this work, we developed an integrated workflow combining laser microdissection (LMD), hydrophilic interaction liquid chromatography (HILIC), and cyclic ion mobility mass spectrometry (cIM-MS) for the identification and quantification of HS and CS disaccharides from small-scale and spatially resolved mouse brain tissue sections. Through sequential enzymatic digestion of HS and CS chains from the same sample, we profiled not only the common disaccharides that serve as structural signatures for HS and CS, but also rarely detected HS disaccharides containing saturated uronic acid residues, as well as lyase-resistant 3-O-sulfated HS tetrasaccharides. HILIC enabled the separation of HS and CS disaccharides based on their composition and hydrophilicity, while cIM-MS further enhanced the resolution of positional isomers. Quantitative analysis using linear calibration curves revealed disaccharide abundances in small-scale tissue sections collected by LMD. Overall, our finding highlighted the merit of the LMD-HILIC-cIM-MS workflow for HS and CS analysis in spatial GAGomics and its potential for biomarker discovery and therapeutic application studies.

Indexed as

BrainGlycosaminoglycansLaser Capture MicrodissectionAnimalsChondroitin SulfatesChromatography, LiquidHeparan SulfateMass SpectrometryMiceMice, Inbred C57BLMicrodissectionChondroitin SulfatesGlycosaminoglycansHeparan Sulfatechondroitin sulfate (CS)cyclic ion mobility mass spectrometry (cIM-MS)heparan sulfate (HS)laser microdissection (LMD)

Identifiers

PMID41722777
PMCPMC13010399

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.