Evidence map›Paper›PMID 41722465›Full record

ArticleBiomaterials2026

Recapitulating apicobasal tissue polarity in extracellular matrix-incorporated airway organoids.

Zhuowei Gong, Dhruv Bhattaram, Laura Porritt, Kian Golestan, Amir Barati Farimani, Bin Deng, Amy L Ryan, Daniel J Weiss, Xi Ren

Abstract read
In one paragraph

Article in Biomaterials, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Zhuowei GongDepartment of Biomedical Engineering, Carnegie Mellon University, Pittsburgh, USA.
Dhruv BhattaramDepartment of Biomedical Engineering, Carnegie Mellon University, Pittsburgh, USA.
Laura PorrittDepartment of Medicine, University of Vermont, Burlington, USA.
Kian GolestanDepartment of Biomedical Engineering, Carnegie Mellon University, Pittsburgh, USA.
Amir Barati FarimaniDepartment of Mechanical Engineering, Carnegie Mellon University, Pittsburgh, USA.
Bin DengDepartment of Biology, University of Vermont, Burlington, USA.
Amy L RyanDepartment of Anatomy and Cell Biology, University of Iowa, Iowa City, USA; Precision Medicine Center for CF, Carver College of Medicine, University of Iowa, Iowa City, USA.
Daniel J WeissDepartment of Medicine, University of Vermont, Burlington, USA. Electronic address: daniel.weiss@med.uvm.edu.
Xi RenDepartment of Biomedical Engineering, Carnegie Mellon University, Pittsburgh, USA. Electronic address: xiren@cmu.edu.

Funding

Vermont INBRE Administrative Supplement 2024 AWD 118P20GM103449 · NIGMS · UNIVERSITY OF VERMONT & ST AGRIC COLLEGE · PI CHRISTOPHER S FRANCKLYN · 2012 to 2026
$58.4M
Extracellular Matrix Regulation of Airway Epithelial HomeostasisR21HL175617 · NHLBI · UNIVERSITY OF VERMONT & ST AGRIC COLLEGE · PI REN, XI, WEISS, DANIEL J · 2024 to 2025
$433k
Expedited Assessment of Environment-induced Respiratory Ciliopathies Leveraging Motile Apical-out Airway OrganoidsF31HL176100 · NHLBI · CARNEGIE-MELLON UNIVERSITY · PI Dhruv Bhattaram · 2024 to 2026
$99k
NHLBI NIH HHS F31 HL176100NHLBI NIH HHS R21 HL175617NIGMS NIH HHS P20 GM103449
6 · The paper itself

Abstract

The airway epithelium is a dynamic barrier that interfaces with the external environment and internal matrix along its apicobasal axis. To recapitulate this spatial organization and associated cell-ECM interactions in an organoid format, we present the decellularized extracellular matrix-incorporated Apical-out Airway Organoid (dECM-AoAO), which integrates basolateral matrix cues through the incorporation of human lung dECM microparticles (dECM-MPs), while maintaining direct apical exposure to the exterior. Compared to ECM-free AoAOs, dECM incorporation diversifies lineage distribution, more closely recapitulating native epithelial composition and responsiveness to pathogenic stimulation. Harnessing dECM-AoAO locomotion driven by outward-facing ciliary beating, we developed an experimental and computational pipeline for batch analysis of organoid motility as a functional readout of ciliary activity. Furthermore, dECM-AoAOs are compatible with cryopreservation, retaining viability, lineage composition, and ciliary function upon revival. Together, this work establishes the dECM-AoAO as a physiologically relevant model system for investigating epithelial-ECM crosstalk during airway homeostasis, pathogenesis, and injury responses.

Indexed as

Decellularized Extracellular MatrixExtracellular MatrixLungOrganoidsAnimalsCell PolarityCiliaEpithelial CellsHumansDecellularized Extracellular MatrixApical-out airway organoid (AoAO)Ciliary motilityCryopreservationDecellularized extracellular matrix (dECM)Mucociliary differentiationSwarm analysis

Identifiers

PMID41722465
PMCPMC13110074

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.