Evidence map›Paper›PMID 41720803›Full record

ArticleNature communications2026

Mechanism of beta-arrestin 1 mediated Src activation via Src SH3 domain revealed by cryo-electron microscopy.

Natalia Pakharukova, Brittany N Thomas, Harsh Bansia, Linus Li, Dana K Bassford, Rinat R Abzalimov, Jihee Kim, Alem W Kahsai, Biswaranjan Pani, Kunhong Xiao and 6 more

Abstract read
In one paragraph

Article in Nature communications, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed.

  1. Article
  2. Review
  3. Article
  4. Article
  5. Nickel binding to c-Src SH3 domain facilitates crystallization.bioRxiv : the preprint server for biology · 2025
    Article
  6. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

16 authors.

Natalia PakharukovaDepartment of Medicine, Duke University Medical Center, Durham, NC, 27710, USA.
Brittany N ThomasDepartment of Medicine, Duke University Medical Center, Durham, NC, 27710, USA.ORCID http://orcid.org/0000-0001-8317-7538
Harsh BansiaDepartment of Molecular Pathobiology, College of Dentistry, New York University, New York, 10010, USA.
Linus LiDepartment of Medicine, Duke University Medical Center, Durham, NC, 27710, USA.
Dana K BassfordDepartment of Medicine, Duke University Medical Center, Durham, NC, 27710, USA.
Rinat R AbzalimovStructural Biology Initiative, CUNY Advanced Science Research Center, New York, NY, 10031, USA.
Jihee KimDepartment of Medicine, Duke University Medical Center, Durham, NC, 27710, USA.
Alem W KahsaiDepartment of Medicine, Duke University Medical Center, Durham, NC, 27710, USA.
Biswaranjan PaniDepartment of Medicine, Duke University Medical Center, Durham, NC, 27710, USA.ORCID http://orcid.org/0000-0003-4811-4632
Kunhong XiaoCenter for Proteomics & Artificial Intelligence, Allegheny Health Network Cancer Institute, Pittsburgh, PA, 15202, USA.ORCID http://orcid.org/0000-0002-1069-1226
Roni OchakovskiDepartment of Medicine, Duke University Medical Center, Durham, NC, 27710, USA.
Shibo LiuStructural Biology Initiative, CUNY Advanced Science Research Center, New York, NY, 10031, USA.
Xingdong ZhangDepartment of Medicine, Duke University Medical Center, Durham, NC, 27710, USA.
Seungkirl AhnDepartment of Medicine, Duke University Medical Center, Durham, NC, 27710, USA.ORCID http://orcid.org/0000-0001-5681-3789
Amedee des GeorgesDepartment of Molecular Pathobiology, College of Dentistry, New York University, New York, 10010, USA. a.des.georges@nyu.edu.ORCID http://orcid.org/0000-0002-9704-3781
Robert J LefkowitzDepartment of Medicine, Duke University Medical Center, Durham, NC, 27710, USA. lefko001@receptor-biol.duke.edu.ORCID http://orcid.org/0000-0003-1472-7545

Funding

Understanding membrane proteins’ allosteric modulation with cryo-EMR35GM133598 · NIGMS · NEW YORK UNIVERSITY · PI Amedee des Georges · 2019 to 2026
$3.4M
TimsTOF-fleX MALDI-2 mass-spectrometerS10OD036268 · OD · ADVANCED SCIENCE RESEARCH CENTER · PI ABZALIMOV, RINAT · 2024 to 2024
$1.5M
European Molecular Biology Organization (EMBO) ALTF 1071-2017Human Frontier Science Program (HFSP) LT000174/2018NIGMS NIH HHS R35 GM133598NIH HHS S10 OD036268Prostate Cancer Foundation (PCF) 2023CHAL4223U.S. Department of Health & Human Services | NIH | National Heart, Lung, and Blood Institute (NHLBI) R01 HL16037U.S. Department of Health & Human Services | NIH | National Institute of General Medical Sciences (NIGMS) R35GM133598
6 · The paper itself

Abstract

Beta-arrestins (βarrs) are key regulators and transducers of G-protein coupled receptor signaling; however, little is known of how βarrs communicate with their downstream effectors. Here, we delineate structural mechanisms underlying βarr-mediated signal transduction. Using cryo-electron microscopy, we elucidate how βarr1 recruits and activates the non-receptor tyrosine kinase Src, a well-established signaling partner of βarrs. βarr1 engages Src SH3 through two distinct sites, each employing a different recognition mechanism: a polyproline motif in the N-domain and a non-proline-based interaction in the central crest region. At both sites βarr1 interacts with the aromatic surface of SH3, disrupting the autoinhibited conformation of Src and directly triggering its allosteric activation. This structural evidence establishes βarr1 as an active regulatory protein rather than a passive scaffold and suggests a potentially general mechanism for βarr-mediated signaling across diverse effectors.

Indexed as

beta-Arrestin 1src-Family Kinasessrc Homology DomainsAnimalsCryoelectron MicroscopyHumansModels, MolecularProtein BindingSignal Transductionbeta-Arrestin 1src-Family Kinases

Identifiers

PMID41720803
PMCPMC13035853

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.