Evidence map›Paper›PMID 41716584›Full record

ArticleEcology and evolution2026

A Comparative Analysis of DNA Metabarcoding and Morphological Identification in Diatoms Reveals Similar Patterns of Environmental Response.

Fernanda Gonzalez-Saldias, Joan Gomà, Sandra Garcés-Pastor, Owen S Wangensteen, Albert Pèlachs, Aaron Pérez-Haase

Abstract read
In one paragraph

Article in Ecology and evolution, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Fernanda Gonzalez-SaldiasDepartment of Evolutionary Biology, Ecology, and Environmental Sciences University of Barcelona Barcelona Spain.ORCID https://orcid.org/0009-0008-4617-6219
Joan GomàDepartment of Evolutionary Biology, Ecology, and Environmental Sciences University of Barcelona Barcelona Spain.ORCID https://orcid.org/0000-0002-6312-1948
Sandra Garcés-PastorDepartment of Evolutionary Biology, Ecology, and Environmental Sciences University of Barcelona Barcelona Spain.ORCID https://orcid.org/0000-0001-5652-7264
Owen S WangensteenDepartment of Evolutionary Biology, Ecology, and Environmental Sciences University of Barcelona Barcelona Spain.ORCID https://orcid.org/0000-0001-5593-348X
Albert PèlachsGeography Department Universitat Autònoma de Barcelona Cerdanyola del Vallès Spain.ORCID https://orcid.org/0000-0002-8075-1044
Aaron Pérez-HaaseDepartment of Evolutionary Biology, Ecology, and Environmental Sciences University of Barcelona Barcelona Spain.ORCID https://orcid.org/0000-0002-5974-7374

Funding

LIPID PEROXIDATION, TOXICANTS, AND MITOCHONDRIAK22ES000369 · NIEHS · UNIVERSITY OF NORTH DAKOTA · PI PICKLO, MATTHEW J · 2001 to 2003
$319k
NIEHS NIH HHS K22 ES000369
6 · The paper itself

Abstract

Diatoms are widely used as environmental sentinels and are commonly studied through morphological identification. However, this method requires specialist knowledge, which is becoming increasingly scarce, resulting in species identification becoming costly, time-consuming, and difficult. DNA metabarcoding offers an alternative method to semiautomate some identification processes to circumvent these difficulties, thus minimizing identification costs while providing objective and reliable information. However, discrepancies between marker genes and morphological identification remain unsolved. This study investigated the 66 diatom communities on 26 high mountain mires in the Pyrenees by identifying morphological species and sequencing the Cytochrome c oxidase I (COI) and 18S rRNA markers. We assessed whether morphological and molecular approaches reveal the same patterns of alpha and beta diversity. Our results showed a strong correlation between beta diversity patterns of diatoms obtained by morphological identification and genetic markers. In contrast, alpha diversity calculated through molecular studies underestimated species richness and the Shannon index. The diatom community was chiefly driven by pH, Mg, and temperature, reflecting these patterns in morphological and molecular data. DNA metabarcoding also proved to represent diatom community patterns and the roles of the environmental drivers as clearly as in morphological identifications in high mountain mire diatom communities.

Indexed as

18S rRNABacillariophyceaeCOIecological gradientmirespH

Identifiers

PMID41716584
PMCPMC12912883

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.