Evidence map›Paper›PMID 41714903›Full record

ArticlePlant biotechnology journal2026

The Rice E3 Ubiquitin Ligase Gene OsPUB77 Regulates Head Milled Rice Rate by Affecting Grain Starch Accumulation.

Shuai Nie, Luo Chen, Leilei Kong, Minhua Zheng, Jingfang Dong, Song Bai, Dilin Liu, Shaohong Zhang, Hao Chen, Haifei Hu and 3 more

Abstract read
In one paragraph

Article in Plant biotechnology journal, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors.

Shuai NieRice Research Institute, Guangdong Academy of Agricultural Sciences, Guangzhou, P. R. China.
Luo ChenRice Research Institute, Guangdong Academy of Agricultural Sciences, Guangzhou, P. R. China.
Leilei KongRice Research Institute, Guangdong Academy of Agricultural Sciences, Guangzhou, P. R. China.
Minhua ZhengRice Research Institute, Guangdong Academy of Agricultural Sciences, Guangzhou, P. R. China.
Jingfang DongRice Research Institute, Guangdong Academy of Agricultural Sciences, Guangzhou, P. R. China.
Song BaiRice Research Institute, Guangdong Academy of Agricultural Sciences, Guangzhou, P. R. China.
Dilin LiuRice Research Institute, Guangdong Academy of Agricultural Sciences, Guangzhou, P. R. China.
Shaohong ZhangRice Research Institute, Guangdong Academy of Agricultural Sciences, Guangzhou, P. R. China.
Hao ChenRice Research Institute, Guangdong Academy of Agricultural Sciences, Guangzhou, P. R. China.
Haifei HuRice Research Institute, Guangdong Academy of Agricultural Sciences, Guangzhou, P. R. China.
Xin LuanRice Research Institute, Guangdong Academy of Agricultural Sciences, Guangzhou, P. R. China.
Junliang ZhaoRice Research Institute, Guangdong Academy of Agricultural Sciences, Guangzhou, P. R. China.ORCID https://orcid.org/0000-0003-3194-3290
Wu YangRice Research Institute, Guangdong Academy of Agricultural Sciences, Guangzhou, P. R. China.ORCID https://orcid.org/0000-0002-0900-453X

Funding

Basic and Applied Basic Research Foundation of Guangdong Province 2025A1515012969Elite Rice Plan of GDRRI 2024YG07Guangdong Key Laboratory of Rice Science and Technology 2023B1212060042National Natural Science Foundation of China 32272085Scientific and Technological Plan of Guangzhou 2024A04J7152Special Funding for the Construction of the High-Level Academy of Agricultural Sciences NYQS202606Special Funding for the Construction of the High-Level Academy of Agricultural Sciences R2026PY-BJ001
6 · The paper itself

Abstract

Head milled rice rate (HMRR) is a critical trait determining rice yield and economic value, yet its genetic basis remains poorly understood. Here, through genome-wide association study across multiple environments, we identified a major QTL, qHMRR4-2, and pinpointed OsPUB77, a U-box E3 ubiquitin ligase, as the causal gene. Haplotype analysis and transgenic validation revealed that both knockout and overexpression of OsPUB77 significantly reduce HMRR by disrupting starch accumulation and increasing grain chalkiness. We further demonstrated that OsMADS29 directly binds to the OsPUB77 promoter and represses its transcription. Transcriptomic analysis indicated that OsPUB77 maintains metabolic homeostasis essential for starch biosynthesis during grain filling. Our findings establish the OsMADS29-OsPUB77 module as a critical regulator of HMRR and provide a promising target for improving rice milling quality through precision breeding.

Indexed as

OryzaPlant ProteinsStarchUbiquitin-Protein LigasesEdible GrainGene Expression Regulation, PlantGenome-Wide Association StudyPlants, Genetically ModifiedQuantitative Trait LociSeedsPlant ProteinsStarchUbiquitin-Protein Ligases

Identifiers

PMID41714903
PMCPMC13205682

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.