Evidence map›Paper›PMID 41713404›Full record

ArticleInfluenza and other respiratory viruses2026

Pathogenesis and Transmission of a Reassorted H1 Influenza A Virus Detected in North American Swine.

Débora B Goulart, Carine K Souza, Giovana C Zanella, Celeste A Snyder, Janice C Zanella, Alexey Markin, Bailey Arruda, Tavis K Anderson, Amy L Baker

Abstract read
In one paragraph

Article in Influenza and other respiratory viruses, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Débora B GoulartNational Animal Disease Center, Agricultural Research Service, U.S. Department of Agriculture, Ames, Iowa, USA.ORCID https://orcid.org/0000-0001-6248-2808
Carine K SouzaNational Animal Disease Center, Agricultural Research Service, U.S. Department of Agriculture, Ames, Iowa, USA.
Giovana C ZanellaNational Animal Disease Center, Agricultural Research Service, U.S. Department of Agriculture, Ames, Iowa, USA.
Celeste A SnyderNational Animal Disease Center, Agricultural Research Service, U.S. Department of Agriculture, Ames, Iowa, USA.
Janice C ZanellaNational Animal Disease Center, Agricultural Research Service, U.S. Department of Agriculture, Ames, Iowa, USA.
Alexey MarkinNational Animal Disease Center, Agricultural Research Service, U.S. Department of Agriculture, Ames, Iowa, USA.
Bailey ArrudaNational Animal Disease Center, Agricultural Research Service, U.S. Department of Agriculture, Ames, Iowa, USA.
Tavis K AndersonNational Animal Disease Center, Agricultural Research Service, U.S. Department of Agriculture, Ames, Iowa, USA.ORCID https://orcid.org/0000-0002-3138-5535
Amy L BakerNational Animal Disease Center, Agricultural Research Service, U.S. Department of Agriculture, Ames, Iowa, USA.

Funding

NIAID Centers of Excellence for Influenza Research and Response: Universal Influenza Vaccine Research Activities75N93021C00015 · NIAID · UNIVERSITY OF PENNSYLVANIA · PI HENSLEY, SCOTT · 2021 to 2025
$50.7M
CDC HHS 21FED2100395IPDCDC HHS 24FED2400250IPCNIAID NIH HHS 75N93021C00015USDA-APHIS 5030-32000-231-104-IUSDA-APHIS 5030-32000-231-111-IUSDA-ARS 0500-00093-001-00-DUSDA-ARS 5030-32000-231-000D
6 · The paper itself

Abstract

backgroundThe USDA influenza A virus in swine national surveillance plan identified an increase in the detection frequency of a group of swine 1A.1.1.3 hemagglutinin (HA) clade viruses. This change was associated with reassortment events that resulted in new neuraminidase (NA) gene pairings. We hypothesized that the new N1 genes improved the transmission efficiency of the virus.

methodsWe assessed the pathogenesis and transmission of four H1 1A.1.1.3 swine strains paired with different NA subtypes and lineages, all of which shared similar internal gene constellations.

resultsThere was little variation in the titers of viral nasal shedding across the groups, and the different surface protein pairings had no effect on transmission efficiency. All IAV strains, reflecting both pre- and post-reassortment genetic patterns, were transmitted to naïve indirect contact pigs.

conclusionsThese data indicate that the combinations of 1A.1.1.3 HA with NA subtypes had little impact on transmission. These findings suggest that the increased detection of the H1 1A.1.1.3 clade in the United States was unlikely directly due to altered replication, transmission, or antigenic drift, but perhaps due to changes in population immunity resulting from differential vaccine use or prior exposure, variations in production practices, or ecological conditions.

Indexed as

Influenza A virusOrthomyxoviridae InfectionsReassortant VirusesSwine DiseasesAnimalsHemagglutinin Glycoproteins, Influenza VirusNeuraminidaseNorth AmericaSwineViral ProteinsVirus SheddingHemagglutinin Glycoproteins, Influenza VirusNA protein, influenza A virusNeuraminidaseViral Proteinsinfluenza viruspandemicpathogenesisreassortmentswinetransmissionzoonosis

Identifiers

PMID41713404
PMCPMC12920019

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.