Evidence map›Paper›PMID 41712685›Full record

ArticleBriefings in bioinformatics2026

Reply to: 'testing the generalizability of DeepPlantAllergy on challenging allergen prediction scenarios'.

Wala Dhouib, Fakher Frikha, Ahmed Rebai, Najla Kharrat

Abstract readLetter
PubMed Full text at PMC Publisher
In one paragraph

Article in Briefings in bioinformatics, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Wala DhouibLaboratory of Molecular and Cellular Screening Processes, Centre of Biotechnology of Sfax, University of Sfax, Sidi Mansour Road Km 6, 1177, Sfax 3018, Tunisia.ORCID 0000-0003-0800-130X
Fakher FrikhaLaboratory of Molecular and Cellular Screening Processes, Centre of Biotechnology of Sfax, University of Sfax, Sidi Mansour Road Km 6, 1177, Sfax 3018, Tunisia.
Ahmed RebaiLaboratory of Molecular and Cellular Screening Processes, Centre of Biotechnology of Sfax, University of Sfax, Sidi Mansour Road Km 6, 1177, Sfax 3018, Tunisia.
Najla KharratLaboratory of Molecular and Cellular Screening Processes, Centre of Biotechnology of Sfax, University of Sfax, Sidi Mansour Road Km 6, 1177, Sfax 3018, Tunisia.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

This response addresses the comments raised in the Letter to the Editor titled 'Testing the Generalizability of DeepPlantAllergy on Challenging Allergen Prediction Scenarios.' We clarify the intended use of DeepPlantAllergy and provide additional context on the dataset construction. We conclude that, while the issue highlighted in the Letter is interesting, it pertains to a different validation objective than that of the present study.

Indexed as

AllergensDeep LearningHypersensitivityHumansPrediction AlgorithmsAllergensallergenicity predictiondeep learning

Identifiers

PMID41712685
PMCPMC12919427

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.