Evidence map›Paper›PMID 41710994›Full record

ArticleThe plant genome2026

Genome-wide association studies and genomics-informed breeding for tuber dormancy in tetraploid potatoes.

Ao Jiao, Sanjeev Gautam, Jeewan Pandey, Douglas C Scheuring, Jeffrey W Koym, M Isabel Vales

Abstract read
In one paragraph

Article in The plant genome, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Ao JiaoDepartment of Horticultural Sciences, Texas A&M University, College Station, Texas, USA.ORCID https://orcid.org/0009-0001-6212-6448
Sanjeev GautamDepartment of Horticultural Sciences, Texas A&M University, College Station, Texas, USA.ORCID https://orcid.org/0009-0008-9215-4133
Jeewan PandeyDepartment of Horticultural Sciences, Texas A&M University, College Station, Texas, USA.ORCID https://orcid.org/0000-0003-3437-1785
Douglas C ScheuringDepartment of Horticultural Sciences, Texas A&M University, College Station, Texas, USA.ORCID https://orcid.org/0000-0003-3939-3916
Jeffrey W KoymTexas A&M AgriLife Research and Extension Center, Lubbock, Texas, USA.ORCID https://orcid.org/0000-0001-8501-3895
M Isabel ValesDepartment of Horticultural Sciences, Texas A&M University, College Station, Texas, USA.ORCID https://orcid.org/0000-0002-6895-3137

Funding

National Institute of Food and Agriculture 2020-51181-32156National Institute of Food and Agriculture 2021-34141-35449National Institute of Food and Agriculture 2023-34141-35449USDA
6 · The paper itself

Abstract

Upon harvest, potato (Solanum tuberosum L.) tubers enter a dormant state and do not sprout even under favorable conditions. Early dormancy break causes tuber spoilage and reduces postharvest quality. Common sprout control methods may compromise tuber quality, raise health and environmental concerns, and increase costs. Thus, potato varieties with long tuber dormancy are desirable to reduce tuber spoilage and lower costs for sprout prevention. This study aimed to (i) explore phenotypic variation in tuber dormancy length among advanced tetraploid potato genotypes and several public cultivars, (ii) understand the genetic basis of tuber dormancy, and (iii) obtain genomic-estimated breeding values (GEBVs) using genomic selection. A panel of 216 tetraploid potato genotypes, mostly from the Texas A&M Potato Breeding Program, was grown in Springlake and Dalhart, TX, from 2019 to 2021, for tuber dormancy evaluation. An additional panel of 82 genotypes was evaluated in 2022. A wide range of tuber dormancy lengths was observed, and significant variations were found among genotypes, field locations, storage conditions, and market groups. Quantitative trait loci were detected on chromosomes 1, 2, 3, 5, 6, 9, and 11, each explaining up to 11.8% of phenotypic variation. In addition, GEBVs were obtained using StageWise. Potato genotypes with high GEBVs for tuber dormancy length are potential donors of genes that can extend the dormancy period. Variation in tuber dormancy among advanced tetraploid potato genotypes highlighted the potential for selection. The genomic regions identified and the GEBVs provided valuable insights into the genetic basis of potato tuber dormancy, offering guidance for breeding.

Indexed as

Plant DormancyPlant TubersQuantitative Trait LociSolanum tuberosumGenome, PlantGenome-Wide Association StudyPhenotypePlant BreedingSelective BreedingSpecies SpecificityTetraploidy

Identifiers

PMID41710994
PMCPMC12919731

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.