Evidence map›Paper›PMID 41706189›Full record

ArticleMolecular genetics and genomics : MGG2026

Immunoinformatics-guided design of a multi-epitope vaccine targeting the envelopment polyprotein of oropouche virus.

Muhammad Naveed, Aroosa Athar, Afifa Tariq, Muhammad Asim, Muhammad Nouman Majeed, Rania Ali El Hadi Mohamed, Manal F Elkhadragy, Maher S Alwethaynani, Mai M Almsaud, Ghulam Nabi

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Article in Molecular genetics and genomics : MGG, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Muhammad NaveedDepartment of Biotechnology, Faculty of Science and Technology, University of Central Punjab, Lahore, 54000, Pakistan. naveed.quaidian@gmail.com.
Aroosa AtharDepartment of Biotechnology, Faculty of Science and Technology, University of Central Punjab, Lahore, 54000, Pakistan.
Afifa TariqDepartment of Biotechnology, Faculty of Science and Technology, University of Central Punjab, Lahore, 54000, Pakistan.
Muhammad AsimDepartment of Biotechnology, Faculty of Science and Technology, University of Central Punjab, Lahore, 54000, Pakistan.
Muhammad Nouman MajeedDepartment of Biotechnology, Faculty of Science and Technology, University of Central Punjab, Lahore, 54000, Pakistan.
Rania Ali El Hadi MohamedDepartment of Biology, College of Science, Princess Nourah bint Abdulrahman University, P.O.Box 84428, Riyadh, 11671, Saudi Arabia.
Manal F ElkhadragyDepartment of Biology, College of Science, Princess Nourah bint Abdulrahman University, P.O.Box 84428, Riyadh, 11671, Saudi Arabia.
Maher S AlwethaynaniDepartment of Clinical Laboratory Sciences, College of Applied Medical Sciences, Shaqra University, Alquwayiyah, Riyadh, Saudi Arabia.
Mai M AlmsaudDepartment of Biology, College of Science, Imam Mohammad Ibn Saud Islamic University (IMSIU), Riyadh, Saudi Arabia.
Ghulam NabiCenter for Animal Sciences and Fisheries, The University of Swat, Khyber Pakhtunkhwa, Swat, 19200, Pakistan. ghulamnabiqau@gmail.com.ORCID http://orcid.org/0000-0001-5256-0083

Funding

Princess Nourah Bint Abdulrahman University PNURSP2026R890
6 · The paper itself

Abstract

Oropouche virus is an emerging and neglected arbovirus of growing public health concern in Latin America, with recent epidemiological surveillance reporting 832 confirmed cases in 2023 and 5,913 cases during early 2024 in Brazil, predominantly in the Amazon region. Despite its increasing spread, no licensed vaccines or antiviral therapies are currently available. In this study, we aimed to design and computationally evaluate a multi-epitope vaccine candidate targeting the OROV envelopment polyprotein using integrated immunoinformatics, molecular modeling, and immune simulation approaches. The complete polyprotein sequence was analyzed to identify antigenic, non-allergenic, and non-toxic cytotoxic and helper T-cell epitopes. Selected epitopes were assembled into a chimeric construct incorporating an adjuvant, suitable linkers, and a PADRE sequence to enhance immune recognition. Physicochemical properties, tertiary structure, receptor binding, dynamic stability, and immune response potential were comprehensively evaluated in silico. The final vaccine construct comprised 241 amino acids and demonstrated favorable stability with instability index score of 24.95, hydrophilicity with GRAVY score of - 0.241, and with an estimated global population coverage of 94.07%. Molecular docking revealed favourable binding affinity to TLR4 with a binding energy of - 1067.1, while molecular dynamics simulations showed structural stability, with an average RMSD of 0.40 nm and limited fluctuations. Immune simulations predicted rapid antigen clearance, robust Th1-polarized responses characterized by strong IFN-γ and IL-2 production, sustained IgG responses, and expansion of memory B and T cells. Overall, these findings indicate that the proposed multi-epitope vaccine construct is stable, immunogenic, and capable of inducing broad immune responses, providing a strong rationale for experimental validation and future vaccine development against Oropouche virus.

Indexed as

Bunyaviridae InfectionsEpitopes, T-LymphocyteOrthobunyavirusPolyproteinsViral VaccinesAnimalsHumansImmunoinformaticsMolecular Docking SimulationMolecular Dynamics SimulationProtein Subunit VaccinesEpitopes, T-LymphocytePolyproteinsProtein Subunit VaccinesViral VaccinesAlpafold3Molecular dockingMolecular dynamics simulations.Multi-epitope vaccineOropouche virusTLR4

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.