Evidence map›Paper›PMID 41705132›Full record

ReviewBiology methods & protocols2026

The protocol for mesoscopic wide-field optical imaging in mice: from zero to hero.

Evgenia N Kislukhina, Natalia V Lizunova, Alexander M Surin, Zanda V Bakaeva

Abstract readReview
In one paragraph

Review in Biology methods & protocols, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Evgenia N KislukhinaLaboratory of Neurobiology and Fundamentals of Brain Development, National Medical Research Center for Children's Health Federal State Autonomous Institution of the Russian Federation Ministry of Health, Building 1, 2 Lomonosovsky Prospekt, Moscow, 119991, Russia.ORCID https://orcid.org/0000-0001-9217-1330
Natalia V LizunovaLaboratory of Neurobiology and Fundamentals of Brain Development, National Medical Research Center for Children's Health Federal State Autonomous Institution of the Russian Federation Ministry of Health, Building 1, 2 Lomonosovsky Prospekt, Moscow, 119991, Russia.ORCID https://orcid.org/0000-0002-6644-7716
Alexander M SurinLaboratory of Fundamental and Applied Problems of Pain, Institute of General Pathology and Pathophysiology, 8 Baltiyskaya Street, Moscow, 125315, Russia.ORCID https://orcid.org/0000-0003-1104-5442
Zanda V BakaevaLaboratory of Neurobiology and Fundamentals of Brain Development, National Medical Research Center for Children's Health Federal State Autonomous Institution of the Russian Federation Ministry of Health, Building 1, 2 Lomonosovsky Prospekt, Moscow, 119991, Russia.ORCID https://orcid.org/0000-0002-2797-3270

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

This article provides protocols that enable researchers to master mesoscopic wide-field optical brain imaging from scratch. The protocols describe surgery for wide-field cranial window creation in mice, as well as the imaging process and setup. The protocols for components of the imaging system selection and assembly, creation of a headplate for fixation, and training mice are also provided. The final section briefly outlines methods for data processing. The described procedure can be used to visualize the dorsal cortex using wide-field optical imaging and laser-speckle contrast imaging methods. The distinguishing features of our protocol include: a wide cranial window (up to 60% of the entire cortex), skull thinning (without craniotomy), a UV-curable transparent coating (gel polish), and the ability to perform measurements in awake, behaving mice. During the surgery, a helicopter-shaped headplate with a lower surface congruent to the skull surface is mounted on the mouse's head. This lightweight headplate allows for secure head fixation during movement eliminating the need for alignment during data analysis. Cranial window remains sufficiently transparent for at least three months. Wide-field optical imaging enables the recording of brain haemodynamics and energy metabolism (FAD concentration dynamics) in wild-type mice. The use of transgenic animals expressing genetically encoded sensors allows for the measurement of ions concentrations (e.g. Ca

Indexed as

calcium imagingcranial windowhaemodynamicsintrinsic brain signalsskull thinning

Identifiers

PMID41705132
PMCPMC12908863

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.